BLASTX nr result

ID: Papaver22_contig00022682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022682
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   108   1e-37
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   104   4e-37
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   104   4e-37
ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-35
ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [M...   100   5e-35

>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223539109|gb|EEF40705.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  108 bits (269), Expect(2) = 1e-37
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = +1

Query: 1   VNAGASSYQPFSSYGGGWNLTFPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGRF 180
           V+ G+S +QP+   GG  +  FPVVRLRGLPFNCTDIDI+KFF GLDI+D LLVNKNGRF
Sbjct: 36  VSGGSSGFQPYGYGGGFQSAPFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRF 95

Query: 181 SGEAFVVFSNTM 216
           +GEAFVVF+  M
Sbjct: 96  TGEAFVVFAGAM 107



 Score = 73.2 bits (178), Expect(2) = 1e-37
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +2

Query: 281 EVALQKDHQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYD 403
           E ALQ+D QNMGRRYVEVFRC +QDYY+A++AE+NYEG YD
Sbjct: 110 EFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYD 150


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
           vinifera]
          Length = 264

 Score =  104 bits (260), Expect(2) = 4e-37
 Identities = 51/73 (69%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   VNAGASSYQPFSSYGGGWNL-TFPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGR 177
           V++ AS +QP+  YG G+   TFPVVRLRGLPFNCTDIDI+KFF GLDI+D LLVNK+GR
Sbjct: 36  VSSSASGFQPYG-YGSGFQPPTFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGR 94

Query: 178 FSGEAFVVFSNTM 216
           FSGEA+VVF+ +M
Sbjct: 95  FSGEAYVVFAGSM 107



 Score = 75.1 bits (183), Expect(2) = 4e-37
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +2

Query: 278 SEVALQKDHQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYD 403
           ++ ALQ+D QNMGRRYVEVFRC KQDYYHA+++E+NYEG YD
Sbjct: 109 ADFALQRDRQNMGRRYVEVFRCKKQDYYHAVASEVNYEGIYD 150


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  104 bits (260), Expect(2) = 4e-37
 Identities = 51/73 (69%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   VNAGASSYQPFSSYGGGWNL-TFPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGR 177
           V++ AS +QP+  YG G+   TFPVVRLRGLPFNCTDIDI+KFF GLDI+D LLVNK+GR
Sbjct: 29  VSSSASGFQPYG-YGSGFQPPTFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGR 87

Query: 178 FSGEAFVVFSNTM 216
           FSGEA+VVF+ +M
Sbjct: 88  FSGEAYVVFAGSM 100



 Score = 75.1 bits (183), Expect(2) = 4e-37
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +2

Query: 278 SEVALQKDHQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYD 403
           ++ ALQ+D QNMGRRYVEVFRC KQDYYHA+++E+NYEG YD
Sbjct: 102 ADFALQRDRQNMGRRYVEVFRCKKQDYYHAVASEVNYEGIYD 143


>ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|222856662|gb|EEE94209.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  101 bits (251), Expect(2) = 2e-35
 Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   VNAGASSYQPFSSYGGGWNLT-FPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNGR 177
           V++GAS +QP+  YGGG+    FPVVRLRGLPFNC+D++I KFF GLDI+D LLVNK+GR
Sbjct: 29  VSSGASGFQPYG-YGGGFQPPPFPVVRLRGLPFNCSDVEILKFFAGLDIVDVLLVNKSGR 87

Query: 178 FSGEAFVVFSNTM 216
           F+GEAFVVF+  M
Sbjct: 88  FTGEAFVVFAGPM 100



 Score = 73.2 bits (178), Expect(2) = 2e-35
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +2

Query: 281 EVALQKDHQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYD 403
           E ALQ+D QNMGRRYVEVFRC +QDYY+A++AE+NYEG YD
Sbjct: 103 EFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYD 143


>ref|XP_003629130.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355523152|gb|AET03606.1| Heterogeneous nuclear
           ribonucleoprotein F [Medicago truncatula]
          Length = 290

 Score =  100 bits (248), Expect(2) = 5e-35
 Identities = 50/74 (67%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
 Frame = +1

Query: 1   VNAGASSYQPFSSYGGGWNLT--FPVVRLRGLPFNCTDIDIYKFFGGLDIIDCLLVNKNG 174
           V++G  SYQ +   GGG+     FPVVRLRGLPFNCTDIDI KFF GL I+D LLVNK+G
Sbjct: 60  VSSGTGSYQHYGYAGGGFQPPPPFPVVRLRGLPFNCTDIDILKFFAGLTIVDVLLVNKSG 119

Query: 175 RFSGEAFVVFSNTM 216
           RFSGEAFVVF+  M
Sbjct: 120 RFSGEAFVVFAGAM 133



 Score = 72.8 bits (177), Expect(2) = 5e-35
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +2

Query: 281 EVALQKDHQNMGRRYVEVFRCNKQDYYHAISAEMNYEGSYD 403
           E ALQ+D QNMGRRYVEVFRC KQDYY+A++ E+NYEG YD
Sbjct: 136 EFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYEGIYD 176


Top