BLASTX nr result

ID: Papaver22_contig00022615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022615
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   137   1e-30
ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   137   1e-30
ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arab...   135   7e-30
sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   104   1e-20

>ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|222856391|gb|EEE93938.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score =  146 bits (369), Expect = 2e-33
 Identities = 82/166 (49%), Positives = 101/166 (60%)
 Frame = -2

Query: 500 KMEEEEPKFLFETSDDEEERVKPKKSQSPWDFGVYSESVAEEHARRSTTSIDTKISKVRE 321
           ++E+EE +   E   +EE+  K ++ QSPWDF  YSESVAEEHARRSTTSID KIS+ R+
Sbjct: 22  ELEDEEEEA--EGEGEEEKPSKRRQKQSPWDFASYSESVAEEHARRSTTSIDDKISRARQ 79

Query: 320 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKKSVVAKQPFFSSSDGT 141
                                                        +V  ++ FF+ S+GT
Sbjct: 80  QHSTPLTEHADDASSSDSEPDKQEVYKGEDDEGDEDT--------NVEERKSFFAPSEGT 131

Query: 140 SFHANSFMDLHISRPLLRACEALGYNKPTPIQAACIPLALSGRDIC 3
           SFHANSFM+L++SRPLLRACEALGY KPTPIQAACIPLAL+GRDIC
Sbjct: 132 SFHANSFMELNLSRPLLRACEALGYTKPTPIQAACIPLALTGRDIC 177


>ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           28-like [Cucumis sativus]
          Length = 733

 Score =  137 bits (346), Expect = 1e-30
 Identities = 76/164 (46%), Positives = 95/164 (57%)
 Frame = -2

Query: 494 EEEEPKFLFETSDDEEERVKPKKSQSPWDFGVYSESVAEEHARRSTTSIDTKISKVREXX 315
           EE++ +      ++E+E +   +++SPWDF  YSESVA+EHARRSTTS+D KISK+ E  
Sbjct: 21  EEQQEQADQGGEEEEDEPLSRHRTESPWDFASYSESVADEHARRSTTSVDFKISKLLENR 80

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKKSVVAKQPFFSSSDGTSF 135
                                                   T         FF+ SDG SF
Sbjct: 81  SANFTPTADDDGQSSEEESDRQEDYRPEDDDDGTSNAGDSTS--------FFAPSDGASF 132

Query: 134 HANSFMDLHISRPLLRACEALGYNKPTPIQAACIPLALSGRDIC 3
           HANSFM+L++SRPL+RACEALGY KPTPIQAACIPLAL+GRDIC
Sbjct: 133 HANSFMELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDIC 176


>ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
           sativus]
          Length = 733

 Score =  137 bits (345), Expect = 1e-30
 Identities = 74/152 (48%), Positives = 90/152 (59%)
 Frame = -2

Query: 458 DDEEERVKPKKSQSPWDFGVYSESVAEEHARRSTTSIDTKISKVREXXXXXXXXXXXXXX 279
           ++E+E +   +++SPWDF  YSESVA+EHARRSTTS+D KISK+ E              
Sbjct: 33  EEEDEPLSRHRTESPWDFASYSESVADEHARRSTTSVDFKISKLLENRSANFTPTADDDG 92

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXETKKSVVAKQPFFSSSDGTSFHANSFMDLHISR 99
                                       T         FF+ SDG SFHANSFM+L++SR
Sbjct: 93  QSSEEESDRQEDYRPEDDDDGTSNAGDSTS--------FFAPSDGASFHANSFMELNLSR 144

Query: 98  PLLRACEALGYNKPTPIQAACIPLALSGRDIC 3
           PL+RACEALGY KPTPIQAACIPLAL+GRDIC
Sbjct: 145 PLIRACEALGYAKPTPIQAACIPLALTGRDIC 176


>ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
           lyrata] gi|297313946|gb|EFH44369.1| hypothetical protein
           ARALYDRAFT_493213 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score =  135 bits (339), Expect = 7e-30
 Identities = 75/166 (45%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
 Frame = -2

Query: 494 EEEEPKFLFETSDDEEERVKPKKSQSPWDFGVYSESVAEEHARRSTTSIDTKISKVREXX 315
           E+ E     E  +++E+R +   +QSPWDF  YS SV EEHARR TTSID KISK  +  
Sbjct: 46  EDNEEDDEEEEEEEDEKRKRDADAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHR 105

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXET--KKSVVAKQPFFSSSDGT 141
                                                      K      +PFFS+ DG 
Sbjct: 106 PVPISIEEEEEEEEEEEEEEDASDAEPDKQEEYLSEDDGAAEYKPEDFTPKPFFSTVDGV 165

Query: 140 SFHANSFMDLHISRPLLRACEALGYNKPTPIQAACIPLALSGRDIC 3
           SFHA+SFM+L++SRPLLRACE LGY KPTPIQAACIPLAL+GRD+C
Sbjct: 166 SFHADSFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLC 211


>sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
           gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family
           protein, expressed [Oryza sativa Japonica Group]
           gi|125579336|gb|EAZ20482.1| hypothetical protein
           OsJ_36091 [Oryza sativa Japonica Group]
           gi|215706455|dbj|BAG93311.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 802

 Score =  104 bits (259), Expect = 1e-20
 Identities = 48/63 (76%), Positives = 55/63 (87%)
 Frame = -2

Query: 191 KKSVVAKQPFFSSSDGTSFHANSFMDLHISRPLLRACEALGYNKPTPIQAACIPLALSGR 12
           K  VV    FF+SS+G SFHANSF++L++SRPLLRACEALGY KPTPIQAACIPLAL+GR
Sbjct: 173 KSGVVDPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232

Query: 11  DIC 3
           DIC
Sbjct: 233 DIC 235


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