BLASTX nr result

ID: Papaver22_contig00022563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022563
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   122   2e-26
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   121   5e-26
ref|NP_001236315.1| uncharacterized protein LOC100500064 [Glycin...   115   5e-24
ref|XP_004172788.1| PREDICTED: mRNA turnover protein 4 homolog, ...   114   6e-24
ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [...   114   6e-24

>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/71 (77%), Positives = 68/71 (95%)
 Frame = +3

Query: 264 YVFSFENMRNLKFKEFREKLKSNSRFFLGSNKVMQVALGRTDADEVRTGIHKVSQLLHGD 443
           YVFSFENMRNLKFKEFR++LKS+SRFFLGSNKVMQVALGR+D+DE+R G+HK+S+L+ GD
Sbjct: 41  YVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGD 100

Query: 444 AGICFTNLPKD 476
           +G+CFTNL K+
Sbjct: 101 SGLCFTNLSKE 111


>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 264 YVFSFENMRNLKFKEFREKLKSNSRFFLGSNKVMQVALGRTDADEVRTGIHKVSQLLHGD 443
           YVFSFENMRNLKFKEFREKLKS SRFFLGSNKVMQ+A+GR+ ADE+R G+ KVS+LLHGD
Sbjct: 41  YVFSFENMRNLKFKEFREKLKSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGD 100

Query: 444 AGICFTNLPKD 476
            G+ FTNLPK+
Sbjct: 101 TGLFFTNLPKE 111


>ref|NP_001236315.1| uncharacterized protein LOC100500064 [Glycine max]
           gi|255628929|gb|ACU14809.1| unknown [Glycine max]
          Length = 170

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/71 (77%), Positives = 64/71 (90%)
 Frame = +3

Query: 264 YVFSFENMRNLKFKEFREKLKSNSRFFLGSNKVMQVALGRTDADEVRTGIHKVSQLLHGD 443
           YVFSFENMRN K KEFRE+LKSNSRFFLGSNKVMQVALGR+ +DE+R G+HKVS+LL GD
Sbjct: 41  YVFSFENMRNQKLKEFREQLKSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGD 100

Query: 444 AGICFTNLPKD 476
           +G+ FTNL K+
Sbjct: 101 SGMFFTNLSKE 111


>ref|XP_004172788.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Cucumis
           sativus]
          Length = 197

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/71 (70%), Positives = 64/71 (90%)
 Frame = +3

Query: 264 YVFSFENMRNLKFKEFREKLKSNSRFFLGSNKVMQVALGRTDADEVRTGIHKVSQLLHGD 443
           +VF+ ENMRNLKFKE RE+LKS SR F G+NKVMQ++LGR+D+DE+R G+HKVS+LLHG+
Sbjct: 41  FVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGN 100

Query: 444 AGICFTNLPKD 476
            G+CFTNLPK+
Sbjct: 101 TGLCFTNLPKE 111


>ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus]
          Length = 249

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/71 (70%), Positives = 64/71 (90%)
 Frame = +3

Query: 264 YVFSFENMRNLKFKEFREKLKSNSRFFLGSNKVMQVALGRTDADEVRTGIHKVSQLLHGD 443
           +VF+ ENMRNLKFKE RE+LKS SR F G+NKVMQ++LGR+D+DE+R G+HKVS+LLHG+
Sbjct: 61  FVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGN 120

Query: 444 AGICFTNLPKD 476
            G+CFTNLPK+
Sbjct: 121 TGLCFTNLPKE 131


Top