BLASTX nr result

ID: Papaver22_contig00022373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022373
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|2...   637   e-180
gb|ABK95651.1| unknown [Populus trichocarpa]                          635   e-180
gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]      634   e-179
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]     634   e-179
ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|7...   634   e-179

>ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  637 bits (1643), Expect = e-180
 Identities = 310/378 (82%), Positives = 338/378 (89%)
 Frame = +2

Query: 173  SRLVVVQQKQXXXXXXXXXXXXDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 352
            +RLV VQQ+             DFNG RL   +Q KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2    ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIMG 61

Query: 353  GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 532
            GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QPLPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDFE 121

Query: 533  FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 712
            FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122  FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181

Query: 713  VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 892
            VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182  VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241

Query: 893  GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 1072
            G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242  GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301

Query: 1073 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 1252
            HYNPK+FDFGKKKAFPFRDQHFFASI+KAK  LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302  HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361

Query: 1253 AADFSTDDMILEKCLVPQ 1306
             ADF TDD+I+ K LV Q
Sbjct: 362  EADFFTDDLIIGKSLVLQ 379


>gb|ABK95651.1| unknown [Populus trichocarpa]
          Length = 380

 Score =  635 bits (1639), Expect = e-180
 Identities = 309/378 (81%), Positives = 338/378 (89%)
 Frame = +2

Query: 173  SRLVVVQQKQXXXXXXXXXXXXDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 352
            +RLV VQQ+             DFNG RL   ++ KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2    ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSASSSKNILIMG 61

Query: 353  GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 532
            GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QPLPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDFE 121

Query: 533  FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 712
            FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122  FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181

Query: 713  VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 892
            VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182  VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241

Query: 893  GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 1072
            G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242  GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301

Query: 1073 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 1252
            HYNPK+FDFGKKKAFPFRDQHFFASI+KAK  LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302  HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361

Query: 1253 AADFSTDDMILEKCLVPQ 1306
             ADF TDD+I+ K LV Q
Sbjct: 362  EADFFTDDLIIGKSLVLQ 379


>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 380

 Score =  634 bits (1636), Expect = e-179
 Identities = 310/378 (82%), Positives = 337/378 (89%)
 Frame = +2

Query: 173  SRLVVVQQKQXXXXXXXXXXXXDFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMG 352
            +RLV VQQ+             DFNG RL   +Q KR+ WQT+GALQV AS++K ILIMG
Sbjct: 2    ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIMG 61

Query: 353  GTRFIGIFLSRLLVKEGHQVTLFTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYD 532
            GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+Q LPGES+QDY DFSSKI HLKGDRKD++
Sbjct: 62   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFE 121

Query: 533  FVKTSLAAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDA 712
            FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLPH E DA
Sbjct: 122  FVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDA 181

Query: 713  VDPKSRHKGKLETESLLVSKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 892
            VDPKSRHKGKLETESLL S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 182  VDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 241

Query: 893  GNQITQLGHVKDLATAFINVLGNDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELV 1072
            G Q+TQLGHVKDLA AFI VLGN+KASQQVFNISG+KYVTFDGLA+ACAKA GFPEPE+V
Sbjct: 242  GIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIV 301

Query: 1073 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRK 1252
            HYNPK+FDFGKKKAFPFRDQHFFASI+KAK  LGW+PE+DLVEGL DSYNLDFGRGT+RK
Sbjct: 302  HYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRK 361

Query: 1253 AADFSTDDMILEKCLVPQ 1306
             ADF TDD+IL K LV Q
Sbjct: 362  EADFFTDDLILGKSLVLQ 379


>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  634 bits (1635), Expect = e-179
 Identities = 304/356 (85%), Positives = 333/356 (93%)
 Frame = +2

Query: 239  DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 418
            DFNG +L   +QYKRK +Q +GAL V AS+ KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23   DFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82

Query: 419  FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 598
            FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83   FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142

Query: 599  EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 778
            EEVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143  EEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGV 202

Query: 779  NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 958
            NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+ VLG
Sbjct: 203  NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLG 262

Query: 959  NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 1138
            N+KAS+++FNISG+KY+TFDGLARACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263  NEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322

Query: 1139 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 1306
            FAS+EKAK  LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323  FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378


>ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
            gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
            Full=Chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic; Short=CSP41-b; AltName:
            Full=Heteroglycan-interacting protein 1.3; AltName:
            Full=Protein CHLOROPLAST RNA BINDING; AltName:
            Full=Protein Gb5f; Flags: Precursor
            gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
            [Arabidopsis thaliana]
            gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
            [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
            Identical to gb|Y10557 g5bf gene from Arabidopsis
            thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
            gb|T22425, gb|N64934 and gb|T46767 come from this gene
            [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|17979099|gb|AAL47493.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA
            binding protein [Arabidopsis thaliana]
          Length = 378

 Score =  634 bits (1634), Expect = e-179
 Identities = 304/356 (85%), Positives = 333/356 (93%)
 Frame = +2

Query: 239  DFNGIRLKHPIQYKRKEWQTRGALQVKASAAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 418
            DFNG +L   +QYKRK  Q +GAL V AS+ KKILIMGGTRFIG+FLSR+LVKEGHQVTL
Sbjct: 23   DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTL 82

Query: 419  FTRGKAPISQPLPGESEQDYLDFSSKISHLKGDRKDYDFVKTSLAAEGFDVVYDINGREA 598
            FTRGK+PI++ LPGES+QD+ DFSSKI HLKGDRKDYDFVK+SL+AEGFDVVYDINGREA
Sbjct: 83   FTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREA 142

Query: 599  EEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHFESDAVDPKSRHKGKLETESLLVSKGV 778
            EEVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH E DAVDPKSRHKGKLETESLL SKGV
Sbjct: 143  EEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGV 202

Query: 779  NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGNQITQLGHVKDLATAFINVLG 958
            NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSG QI+QLGHVKDLATAF+NVLG
Sbjct: 203  NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLG 262

Query: 959  NDKASQQVFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHF 1138
            N+KAS+++FNISG+KYVTFDGLA+ACAKAGGFPEPE+VHYNPKEFDFGKKKAFPFRDQHF
Sbjct: 263  NEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322

Query: 1139 FASIEKAKSELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKCLVPQ 1306
            FAS+EKAK  LGWKPE+DLVEGLTDSYNLDFGRGTFRK ADF+TDDMIL K LV Q
Sbjct: 323  FASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378


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