BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021869
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   402   e-110
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   395   e-107
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105
ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidops...   387   e-105
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab...   386   e-105

>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  402 bits (1034), Expect = e-110
 Identities = 205/283 (72%), Positives = 214/283 (75%)
 Frame = -1

Query: 1135 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 956
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 955  GVDPQGQSIDPRKIQEHFEDFYEDIFEELNKFGELESLNICDNLADHMVGNVYVQFKEED 776
            GVD QGQ IDPRKIQEHFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 775  QAAAALKALQGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHVKQIGREL 596
            QAAAAL+ALQGRFYSGRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 595  RRKLYGXXXXXXXXXXXXXXXXXXXXXXSGDRHSVEXXXXXXXXXXXXXXXXXXXXXXXX 416
            RRKL+G                         RH  E                        
Sbjct: 181  RRKLFGRYRGYRASRSRSRSVSP-------SRHRREKSNDRRERDYRDRDYRGNGRRSGD 233

Query: 415  XXXXXRHGSPWRNRSPVRGSPVREGSEERRARIEQWNRERYEK 287
                 RHGSP R+R     SPVREGSEERRARIEQWNRER EK
Sbjct: 234  RHDRRRHGSPRRSR-----SPVREGSEERRARIEQWNREREEK 271


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  395 bits (1015), Expect = e-107
 Identities = 203/283 (71%), Positives = 214/283 (75%)
 Frame = -1

Query: 1135 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 956
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 955  GVDPQGQSIDPRKIQEHFEDFYEDIFEELNKFGELESLNICDNLADHMVGNVYVQFKEED 776
            GVD QGQ IDPRKIQEHFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYVQFKEE+
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 775  QAAAALKALQGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHVKQIGREL 596
            QAAAAL+ALQGRFYSGRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 595  RRKLYGXXXXXXXXXXXXXXXXXXXXXXSGDRHSVEXXXXXXXXXXXXXXXXXXXXXXXX 416
            RRKL+G                      S  R S +                        
Sbjct: 181  RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGD-------RGDYRGNGRRSGDKHGS 233

Query: 415  XXXXXRHGSPWRNRSPVRGSPVREGSEERRARIEQWNRERYEK 287
                 RHGSP R+R     SPVREGSEERRARIE WNRER E+
Sbjct: 234  DGGRRRHGSPRRSR-----SPVREGSEERRARIELWNREREER 271


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  388 bits (997), Expect = e-105
 Identities = 197/283 (69%), Positives = 207/283 (73%)
 Frame = -1

Query: 1135 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 956
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 955  GVDPQGQSIDPRKIQEHFEDFYEDIFEELNKFGELESLNICDNLADHMVGNVYVQFKEED 776
            GVD QGQ +DP KIQEHFE+FYEDIFEELNKFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 775  QAAAALKALQGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHVKQIGREL 596
            QAAAAL+ALQGRFYSGRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMHVK IGR+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 595  RRKLYGXXXXXXXXXXXXXXXXXXXXXXSGDRHSVEXXXXXXXXXXXXXXXXXXXXXXXX 416
            RRKL+G                        DR   +                        
Sbjct: 181  RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYDR 240

Query: 415  XXXXXRHGSPWRNRSPVRGSPVREGSEERRARIEQWNRERYEK 287
                 RH           GS VREGSEERRARIEQWNRER EK
Sbjct: 241  EGGRKRH-----------GSTVREGSEERRARIEQWNREREEK 272


>ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
            gi|42573547|ref|NP_974870.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
            gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName:
            Full=Splicing factor U2af small subunit B; AltName:
            Full=U2 auxiliary factor 35 kDa subunit B; AltName:
            Full=U2 small nuclear ribonucleoprotein auxiliary factor
            small subunit B; Short=U2 snRNP auxiliary factor small
            subunit B; AltName: Full=Zinc finger CCCH
            domain-containing protein 60; Short=AtC3H60
            gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor,
            small subunit [Arabidopsis thaliana]
            gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor
            small subunit [Arabidopsis thaliana]
            gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor
            small subunit [Arabidopsis thaliana]
            gi|332007485|gb|AED94868.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
            gi|332007486|gb|AED94869.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
          Length = 283

 Score =  387 bits (994), Expect = e-105
 Identities = 202/285 (70%), Positives = 211/285 (74%), Gaps = 3/285 (1%)
 Frame = -1

Query: 1135 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 956
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 955  GVDPQGQSIDPRKIQEHFEDFYEDIFEELNKFGELESLNICDNLADHMVGNVYVQFKEED 776
            GVDPQGQ +DP KIQ+HFEDFYEDIFEELNKFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 775  QAAAALKALQGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHVKQIGREL 596
             AAAAL+ALQGRFYSGRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHVKQI REL
Sbjct: 121  HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 595  RRKLYGXXXXXXXXXXXXXXXXXXXXXXSGDRHSVEXXXXXXXXXXXXXXXXXXXXXXXX 416
            RRKL+G                          HS E                        
Sbjct: 181  RRKLFGRYRRSYRRGSRSRSRSISPRRKR--EHSRERERGDVRDRDRHGNGKRSSDRSER 238

Query: 415  XXXXXRHGSPWRNRSPVRG-SP--VREGSEERRARIEQWNRERYE 290
                   G   R+ SP R  SP  VREGSEERRARIEQWNRER E
Sbjct: 239  HDRDG--GGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDE 281


>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
            lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
            ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  386 bits (992), Expect = e-105
 Identities = 201/283 (71%), Positives = 210/283 (74%), Gaps = 3/283 (1%)
 Frame = -1

Query: 1135 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 956
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 955  GVDPQGQSIDPRKIQEHFEDFYEDIFEELNKFGELESLNICDNLADHMVGNVYVQFKEED 776
            GVDPQGQ +DP KIQ+HFEDFYEDIFEELNKFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 775  QAAAALKALQGRFYSGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHVKQIGREL 596
             AAAAL+ALQGRFYSGRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHVKQI REL
Sbjct: 121  HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 595  RRKLYGXXXXXXXXXXXXXXXXXXXXXXSGDRHSVEXXXXXXXXXXXXXXXXXXXXXXXX 416
            RRKL+G                          HS E                        
Sbjct: 181  RRKLFGRYRRSYRRGSRSRSRSISPRRKR--EHSRERERGDLRDRDRHGNGKRSSDRSER 238

Query: 415  XXXXXRHGSPWRNRSPVRG-SP--VREGSEERRARIEQWNRER 296
                   G   R+ SP R  SP  VREGSEERRARIEQWNRER
Sbjct: 239  HDRDG--GGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRER 279