BLASTX nr result

ID: Papaver22_contig00021811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021811
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   189   8e-46
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   189   1e-45
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   182   1e-43
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-43
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    156   6e-36

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  189 bits (480), Expect = 8e-46
 Identities = 113/273 (41%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
 Frame = -1

Query: 935 YLLRDSPTDDPHRCSSVDMLDSFVKKVVLSASPTSDG-YIVLVILNETGQLVYCKKGFES 759
           Y LR S + D +  S   M DSF+KK +LS+SP +   +I +VILN+TG L  C+K  +S
Sbjct: 140 YALRTS-SGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDS 198

Query: 758 WKMIDGAKGYSEDVIFYKGLFYAVTKRGALAICDVTGEDPVVTIIKXXXXXXXXXXXXXL 579
           W  ++ A+ Y+EDVIF++GLFYAV K G++A+CDV+G  P V+II               
Sbjct: 199 WTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII--------------- 243

Query: 578 VDYDRCYSDELLYLVDAFGELLLIARYFEHVMDTEPNMS--VYKTVGFDVFRSDPNSRWL 405
            +  + +  +L YLV++  ELLL+ RY +   D EP+ +  +Y+T  F V R D  +   
Sbjct: 244 -EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAP-- 300

Query: 404 IWKRVYTLGDCMLFLGGNSSFCLLSTDFARCEKNCIYFTDYNFKVKGNVRRLVHDSGVFN 225
            W+ V +LGD  LFLG N S  L S DF  C+ NCIY+TD   +   +      D G+FN
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360

Query: 224 LEDGSIDPLPYCDASSEFFL--SSPIWILTNPC 132
           LEDGSI+PLP     S F +    P+W+  NPC
Sbjct: 361 LEDGSIEPLP----CSHFRIRWPPPLWVTPNPC 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  189 bits (479), Expect = 1e-45
 Identities = 114/273 (41%), Positives = 159/273 (58%), Gaps = 5/273 (1%)
 Frame = -1

Query: 935 YLLRDSPTDDPHRCSSVDMLDSFVKKVVLSASPTSDG-YIVLVILNETGQLVYCKKGFES 759
           Y LR S + D +  S   M DSF+KK +LS+SP +   +I +VILN+TG L  C+K  +S
Sbjct: 140 YALRTS-SGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDS 198

Query: 758 WKMIDGAKGYSEDVIFYKGLFYAVTKRGALAICDVTGEDPVVTIIKXXXXXXXXXXXXXL 579
           W  ++ A+ YSEDVIF++GLFYAV K G++A+CDV+G  P V+II               
Sbjct: 199 WTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII--------------- 243

Query: 578 VDYDRCYSDELLYLVDAFGELLLIARYFEHVMDTEPNMS--VYKTVGFDVFRSDPNSRWL 405
            +  + +  +L YLV++  ELLL+ RY +   D E + +  +Y+T  F V R D  S+  
Sbjct: 244 -EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLD--SKAP 300

Query: 404 IWKRVYTLGDCMLFLGGNSSFCLLSTDFARCEKNCIYFTDYNFKVKGNVRRLVHDSGVFN 225
            W+ V +LGD  LFLG N S  L S DF  C+ NCIY+TD   +   +      D G+FN
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360

Query: 224 LEDGSIDPLPYCDASSEFFL--SSPIWILTNPC 132
           LEDGSI+PLP     S F +    P+W+  NPC
Sbjct: 361 LEDGSIEPLP----CSHFRIRWPPPLWVTPNPC 389


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  182 bits (462), Expect = 1e-43
 Identities = 105/260 (40%), Positives = 152/260 (58%), Gaps = 10/260 (3%)
 Frame = -1

Query: 881 MLDSFVKKVVLSASPTSDG-YIVLVILNETGQLVYCKKGFESWKMIDGAKGYSEDVIFYK 705
           M DSF++KVVLS+SP  D  ++V+ ILN+T  L YC+ G +SW +++ A+ + EDVIF  
Sbjct: 160 MRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVN 219

Query: 704 GLFYAVTKRGALAICDVTGEDPVVTIIKXXXXXXXXXXXXXLVDYDRCYSDELLYLVDAF 525
           G+FYAV K G + ICD++ + P V+                 ++  R    ++ YLV++ 
Sbjct: 220 GMFYAVNKAGQIVICDISSDSPRVSF----------------METPRQAGGDMQYLVNSG 263

Query: 524 GELLLIARY------FEHVMDTEPNMSVYKTVGFDVFRSDPNSRWLIWKRVYTLGDCMLF 363
            ELLL+ RY      F+H  D EP++ +Y+T+ F+VFR D N     W R+ TLGD  LF
Sbjct: 264 DELLLVTRYLDLEYEFDH-PDMEPHL-IYRTIRFEVFRLDWNGPQ--WLRMSTLGDKALF 319

Query: 362 LGGNSSFCLLSTDFARCEKNCIYFTDYNFKVKGNVRRLVHDSGVFNLEDGSIDPLPYC-- 189
           +G NSS  L +TDF+ C  NCIY+TD       +     HD G+F L D +I+PLP C  
Sbjct: 320 IGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLP-CYP 378

Query: 188 -DASSEFFLSSPIWILTNPC 132
            + +S    S P+W+  NPC
Sbjct: 379 RNFTSPLQWSPPLWVSPNPC 398


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  181 bits (458), Expect = 3e-43
 Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 5/268 (1%)
 Frame = -1

Query: 920 SPTDDPHRCSSVDMLDSFVKKVVLSASPTS---DGYIVLVILNETGQLVYCKKGFESWKM 750
           +P  + +  S   M D F+KKVV+S+SP     D ++ + IL  TG L YCK G E W +
Sbjct: 146 NPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNI 205

Query: 749 IDGAKGYSEDVIFYKGLFYAVTKRGALAICDVTGEDPVVTIIKXXXXXXXXXXXXXLVDY 570
           ++ ++ +SEDVI++ GLFYAV K G + +CDV G  P V+ I                + 
Sbjct: 206 VENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFI----------------ET 249

Query: 569 DRCYSDELLYLVDAFGELLLIARYFEHVMDTEPNMSVYKTVGFDVFRSDPNSRWLIWKRV 390
            R    ++ YLV +   LLL+ RY +  +D E ++ +YKT  F+VF+ D N     W+RV
Sbjct: 250 PRQIGGDMQYLVSSGDGLLLVTRYLD--LDVEFDIFIYKTARFEVFKLDLNGP--RWERV 305

Query: 389 YTLGDCMLFLGGNSSFCLLSTDFARCEKNCIYFTDYNFKVKGNVRRLVHDSGVFNLEDGS 210
            +LGD MLF+G NSS  L ++  + C  +CIY+TD       +     HD G+F L DGS
Sbjct: 306 TSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGS 365

Query: 209 IDPLPYCDASSEFFLS--SPIWILTNPC 132
           I+PLP    +S   L    P+WI  NPC
Sbjct: 366 IEPLPCYPRNSYSRLQWPPPLWISPNPC 393


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  156 bits (395), Expect = 6e-36
 Identities = 99/274 (36%), Positives = 144/274 (52%), Gaps = 6/274 (2%)
 Frame = -1

Query: 935 YLLRDSPTDDPHRCSSVDMLDSFVKKVVLSASPTSDG-YIVLVILNETGQLVYCKKGFES 759
           YL+R +PT   +  +   M DSFVKK+VLS+SP++   ++ + ILN +G L +C+ G  S
Sbjct: 138 YLIR-TPTGHIYTRNLRQMRDSFVKKIVLSSSPSNQNDFLAVAILNHSGDLAFCRSGGGS 196

Query: 758 WKMIDGAKGYSEDVIFYKGLFYAVTKRGALAICDVTGEDPVVTIIKXXXXXXXXXXXXXL 579
           W  +D A    EDVI+  G+FYAV K G +++ D+ G    V+++               
Sbjct: 197 WTFVDDAPSDCEDVIYTDGVFYAVDKYGVVSLMDLRGSRSQVSLVAT------------- 243

Query: 578 VDYDRCYSDELLYLVDAFGELLLIARYFEHV---MDTEPNMSVYKTVGFDVFRSDPNSRW 408
              +R  + ++ YLV    ELLL++RY + V   MD E    +Y+TV F+VFR +     
Sbjct: 244 ---ERQLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYRTVRFEVFRMEWEGP- 299

Query: 407 LIWKRVYTLGDCMLFLGGNSSFCLLSTDFARCEKNCIYFTDYNFKVKGNVRRLVHDSGVF 228
             W++V  L +  LF+GGNSS    + DF     NCIY+TD         +    D G+F
Sbjct: 300 -RWEKVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQGQGEEPDMGIF 358

Query: 227 NLEDGSIDPLPYCDASSEF--FLSSPIWILTNPC 132
            L D S +PLPY    S     L  PIW+  NPC
Sbjct: 359 RLCDESFEPLPYYSGGSHSRRRLLPPIWVTPNPC 392


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