BLASTX nr result

ID: Papaver22_contig00021775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021775
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08
ref|XP_004141735.1| PREDICTED: pumilio homolog 23-like [Cucumis ...    59   4e-07
ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine ...    57   2e-06
ref|NP_849878.2| pumilio 23 [Arabidopsis thaliana] gi|42572079|r...    57   2e-06
ref|NP_177376.1| pumilio 23 [Arabidopsis thaliana] gi|75268148|s...    57   2e-06

>ref|XP_002303333.1| predicted protein [Populus trichocarpa] gi|222840765|gb|EEE78312.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 33/71 (46%), Positives = 39/71 (54%)
 Frame = -1

Query: 567 DIDGYATRPDQWKSRQESKQTAYREFYDAFGXXXXXXXXXXXXXXXXXXXXSPPRSVKKM 388
           DIDGYA RPDQW+SRQ SKQ+ Y+EFY AFG                    S    VK +
Sbjct: 628 DIDGYANRPDQWRSRQASKQSTYKEFYAAFGSGEVKSSKSDSFLADTSKSTSLAIGVKNV 687

Query: 387 RVEVDQFLASA 355
           R E+D  LAS+
Sbjct: 688 RKEIDHHLASS 698


>ref|XP_004141735.1| PREDICTED: pumilio homolog 23-like [Cucumis sativus]
           gi|449491830|ref|XP_004159015.1| PREDICTED: LOW QUALITY
           PROTEIN: pumilio homolog 23-like [Cucumis sativus]
          Length = 756

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
 Frame = -1

Query: 567 DIDGYATRPDQWKSRQESKQTAYREFYDAFGXXXXXXXXXXXXXXXXXXXXSPPRSVKKM 388
           D++G+A+RPDQW+S+Q S+++AY+EF+D FG                    S P+ VK M
Sbjct: 625 DVEGFASRPDQWRSKQASRESAYKEFHDTFGSGKSKSSKTDGFLADNSKYKSHPKDVKTM 684

Query: 387 RVEVDQ-------FLASAGTSQPSGSSNFPGLEASMAKL 292
           R E++        FL  +G    S      G + S A +
Sbjct: 685 RQEIEHHTTSGTPFLKMSGFKNKSEKDRHGGKQYSRASM 723


>ref|XP_003521837.1| PREDICTED: pumilio homolog 23-like [Glycine max]
          Length = 745

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 38/70 (54%)
 Frame = -1

Query: 567 DIDGYATRPDQWKSRQESKQTAYREFYDAFGXXXXXXXXXXXXXXXXXXXXSPPRSVKKM 388
           DIDGYA  PD W+S+Q SK++ Y++FY  FG                    S  ++VK+M
Sbjct: 595 DIDGYAANPDHWRSKQASKESTYKDFYTMFGSSDTKLTENDAFLADTSNNKSNKKTVKEM 654

Query: 387 RVEVDQFLAS 358
           R E+DQ L S
Sbjct: 655 RKEIDQSLGS 664


>ref|NP_849878.2| pumilio 23 [Arabidopsis thaliana] gi|42572079|ref|NP_974130.1|
           pumilio 23 [Arabidopsis thaliana]
           gi|332197181|gb|AEE35302.1| pumilio 23 [Arabidopsis
           thaliana] gi|332197183|gb|AEE35304.1| pumilio 23
           [Arabidopsis thaliana]
          Length = 731

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 567 DIDGYATRPDQWKSRQESKQTAYREFYDAFG 475
           DIDGYA+RPDQWKSRQE+KQ+ Y EF  AFG
Sbjct: 600 DIDGYASRPDQWKSRQEAKQSTYNEFCSAFG 630


>ref|NP_177376.1| pumilio 23 [Arabidopsis thaliana]
           gi|75268148|sp|Q9C552.1|PUM23_ARATH RecName:
           Full=Pumilio homolog 23; Short=APUM-23; Short=AtPUM23
           gi|12323652|gb|AAG51785.1|AC067754_1 unknown protein;
           96525-92929 [Arabidopsis thaliana]
           gi|12325275|gb|AAG52582.1|AC016529_13 putative
           RNA-binding domain; 80649-84245 [Arabidopsis thaliana]
           gi|14334736|gb|AAK59546.1| putative RNA-binding domain
           protein [Arabidopsis thaliana]
           gi|15293279|gb|AAK93750.1| putative RNA-binding domain
           protein [Arabidopsis thaliana]
           gi|332197182|gb|AEE35303.1| pumilio 23 [Arabidopsis
           thaliana]
          Length = 753

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 567 DIDGYATRPDQWKSRQESKQTAYREFYDAFG 475
           DIDGYA+RPDQWKSRQE+KQ+ Y EF  AFG
Sbjct: 622 DIDGYASRPDQWKSRQEAKQSTYNEFCSAFG 652


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