BLASTX nr result

ID: Papaver22_contig00021758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021758
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36742.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   127   7e-28
emb|CBI19213.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   124   1e-26
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...   122   3e-26

>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/134 (51%), Positives = 84/134 (62%)
 Frame = +3

Query: 99  FHVYGLKFIIFITILLPYTSAQFNSRQTPPPPPQLENFRPSMXXXXXXXXXAFFFMGFFS 278
           F  +G   +  + +LLP+  AQ +   T   P Q + F  SM         A F MGFFS
Sbjct: 54  FSQHGTVSLWILLLLLPFAGAQSD---TSNDPYQQQRFSSSMAIIIVILVAALFLMGFFS 110

Query: 279 IYIRQCVGQNSPGDTTRAVNGNGIGRSRRAKRGLDPSVIDTFPTFIYSVVKGLKIGKGAL 458
           +YIR C    + G + RA  G  +GRSRR  RGLD +V++TFPTF YSVVKGLKIGKG L
Sbjct: 111 VYIRHCSDSRN-GGSIRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVL 169

Query: 459 ECAVCLNEFEDDET 500
           ECAVCLNEFED+ET
Sbjct: 170 ECAVCLNEFEDNET 183


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/134 (51%), Positives = 84/134 (62%)
 Frame = +3

Query: 99  FHVYGLKFIIFITILLPYTSAQFNSRQTPPPPPQLENFRPSMXXXXXXXXXAFFFMGFFS 278
           F  +G   +  + +LLP+  AQ +   T   P Q + F  SM         A F MGFFS
Sbjct: 26  FSQHGTVSLWILLLLLPFAGAQSD---TSNDPYQQQRFSSSMAIIIVILVAALFLMGFFS 82

Query: 279 IYIRQCVGQNSPGDTTRAVNGNGIGRSRRAKRGLDPSVIDTFPTFIYSVVKGLKIGKGAL 458
           +YIR C    + G + RA  G  +GRSRR  RGLD +V++TFPTF YSVVKGLKIGKG L
Sbjct: 83  VYIRHCSDSRN-GGSIRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVL 141

Query: 459 ECAVCLNEFEDDET 500
           ECAVCLNEFED+ET
Sbjct: 142 ECAVCLNEFEDNET 155


>emb|CBI19213.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  124 bits (310), Expect = 1e-26
 Identities = 69/141 (48%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
 Frame = +3

Query: 96  IFHVYGLKFIIFITILLPYTS---AQFNSRQTPPPPPQL---ENFRPSMXXXXXXXXXAF 257
           IF+  G+  ++ I++LLP  S   AQ  + Q+PPP   +   + F PSM         AF
Sbjct: 4   IFNFNGVACLLNISLLLPLLSCATAQTAAEQSPPPSELMSLAQKFNPSMAIVMIAIVSAF 63

Query: 258 FFMGFFSIYIRQCVGQNSPGDTTRAVNGNGIGRSRRAKRGLDPSVIDTFPTFIYSVVKGL 437
           FFMGFFS+Y+RQC+ +   G     + G G  RS  A RGL+ S I+ FPTF+YS VK  
Sbjct: 64  FFMGFFSVYLRQCIERRVRGRFNTEIVGIGGHRSWMAARGLNSSDIERFPTFVYSAVKAH 123

Query: 438 KIGKGALECAVCLNEFEDDET 500
           KIGK  LECAVCLNEFEDDET
Sbjct: 124 KIGKEGLECAVCLNEFEDDET 144


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  124 bits (310), Expect = 1e-26
 Identities = 69/141 (48%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
 Frame = +3

Query: 96  IFHVYGLKFIIFITILLPYTS---AQFNSRQTPPPPPQL---ENFRPSMXXXXXXXXXAF 257
           IF+  G+  ++ I++LLP  S   AQ  + Q+PPP   +   + F PSM         AF
Sbjct: 15  IFNFNGVACLLNISLLLPLLSCATAQTAAEQSPPPSELMSLAQKFNPSMAIVMIAIVSAF 74

Query: 258 FFMGFFSIYIRQCVGQNSPGDTTRAVNGNGIGRSRRAKRGLDPSVIDTFPTFIYSVVKGL 437
           FFMGFFS+Y+RQC+ +   G     + G G  RS  A RGL+ S I+ FPTF+YS VK  
Sbjct: 75  FFMGFFSVYLRQCIERRVRGRFNTEIVGIGGHRSWMAARGLNSSDIERFPTFVYSAVKAH 134

Query: 438 KIGKGALECAVCLNEFEDDET 500
           KIGK  LECAVCLNEFEDDET
Sbjct: 135 KIGKEGLECAVCLNEFEDDET 155


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score =  122 bits (306), Expect = 3e-26
 Identities = 70/139 (50%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
 Frame = +3

Query: 87  IPWIFHVYGLKFIIFITILL-PYTSAQFNSRQTPPPPPQLENFRPSMXXXXXXXXXAFFF 263
           +P +   +GL   +F+ + L    SAQF     P   P       SM         A FF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 264 MGFFSIYIRQCVGQNSPGDTTRAVNGNGIGRSRRAKRGLDPSVIDTFPTFIYSVVKGLKI 443
           M FFS+YIR C   +SP +T R +     GRSRRA RGLDP+VI+TFPT IYS VK  KI
Sbjct: 61  MAFFSVYIRHC--NDSPSNTVRPITA-AAGRSRRATRGLDPAVIETFPTLIYSDVKEHKI 117

Query: 444 GKGALECAVCLNEFEDDET 500
           GK ALECAVCLNEFEDDET
Sbjct: 118 GKSALECAVCLNEFEDDET 136


Top