BLASTX nr result

ID: Papaver22_contig00021669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021669
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   236   1e-60
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              236   1e-60
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   216   1e-54
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   208   4e-52
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   199   3e-49

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  236 bits (603), Expect = 1e-60
 Identities = 115/181 (63%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3    PPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSD 173
            PP+YTTS+LLP   ESY Q D   RKGT+ Y+L+RSCGGKNEE+ KDAISI+  RIKT++
Sbjct: 1458 PPYYTTSSLLPSSSESYGQWDLS-RKGTITYSLLRSCGGKNEEVQKDAISIDRDRIKTTE 1516

Query: 174  SGNLGCIQAKDRSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDA 353
            S NL CIQAKDR+TG+  IASCVRVAEVAQ+R+T ++F+F+V DLAV AE+ L I++ D 
Sbjct: 1517 SNNLACIQAKDRTTGKTGIASCVRVAEVAQIRITPQKFSFHVIDLAVDAEVKLPINFCDV 1576

Query: 354  LGNPFREAYDAVQIDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSD 533
            LGNPF EA++ + +DA+TNYP++VSINST D +GNI LK +RHGRALLR+S++++  KSD
Sbjct: 1577 LGNPFHEAFNVIPLDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALLRVSINSSPHKSD 1636

Query: 534  Y 536
            Y
Sbjct: 1637 Y 1637


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  236 bits (603), Expect = 1e-60
 Identities = 115/181 (63%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3    PPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSD 173
            PP+YTTS+LLP   ESY Q D   RKGT+ Y+L+RSCGGKNEE+ KDAISI+  RIKT++
Sbjct: 1383 PPYYTTSSLLPSSSESYGQWDLS-RKGTITYSLLRSCGGKNEEVQKDAISIDRDRIKTTE 1441

Query: 174  SGNLGCIQAKDRSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDA 353
            S NL CIQAKDR+TG+  IASCVRVAEVAQ+R+T ++F+F+V DLAV AE+ L I++ D 
Sbjct: 1442 SNNLACIQAKDRTTGKTGIASCVRVAEVAQIRITPQKFSFHVIDLAVDAEVKLPINFCDV 1501

Query: 354  LGNPFREAYDAVQIDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSD 533
            LGNPF EA++ + +DA+TNYP++VSINST D +GNI LK +RHGRALLR+S++++  KSD
Sbjct: 1502 LGNPFHEAFNVIPLDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALLRVSINSSPHKSD 1561

Query: 534  Y 536
            Y
Sbjct: 1562 Y 1562


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  216 bits (551), Expect = 1e-54
 Identities = 111/181 (61%), Positives = 137/181 (75%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3    PPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSD 173
            PP Y TS++LP   ES+ Q D Q  KG + Y+L+RSC  KNE  HKDAISI+G RIKT +
Sbjct: 1361 PPHYITSSILPSSLESHGQWDGQSHKGIITYSLLRSCE-KNEGWHKDAISIDGDRIKTME 1419

Query: 174  SGNLGCIQAKDRSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDA 353
            S NL CIQ KDR+TGR EIASCVRVAEVAQ+R+T+KEF F+V  +AV  ELDL I Y DA
Sbjct: 1420 SNNLACIQGKDRTTGRVEIASCVRVAEVAQIRITNKEFPFHVIHVAVNTELDLSISYFDA 1479

Query: 354  LGNPFREAYDAVQIDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSD 533
            LGNPF EA++AV   A+TNY ++VSI+ T+     I LKA+R+GRALLR+S  +NQQKSD
Sbjct: 1480 LGNPFYEAHNAVSYHAETNYHDIVSIDDTKTDSEKIHLKALRYGRALLRVSFKDNQQKSD 1539

Query: 534  Y 536
            +
Sbjct: 1540 F 1540


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  208 bits (530), Expect = 4e-52
 Identities = 103/181 (56%), Positives = 139/181 (76%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3    PPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSD 173
            PP+YT ++ LP   ES++Q DS+ R+GT+ Y+L+RS   KNE + KDAI I+  RIKT+ 
Sbjct: 1402 PPYYTMTSPLPSSSESHSQNDSRNRRGTISYSLLRSLE-KNEALQKDAIFIDADRIKTTK 1460

Query: 174  SGNLGCIQAKDRSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDA 353
            S NL CIQAKDR+TGR EIASCV+VAEV Q+R+ SKE    + +LAVGAELDL   ++DA
Sbjct: 1461 SNNLACIQAKDRTTGRTEIASCVKVAEVTQIRIASKEVLLNIINLAVGAELDLPTSFYDA 1520

Query: 354  LGNPFREAYDAVQIDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSD 533
            LGNPF EAY+AV   A+TNYP+V+ +N T D  GN+ +KA++HG+AL+R+++S + QKSD
Sbjct: 1521 LGNPFHEAYNAVPFYAETNYPDVLCVNKTADGKGNVHIKAIQHGKALVRVAISEDLQKSD 1580

Query: 534  Y 536
            Y
Sbjct: 1581 Y 1581


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
            sativus]
          Length = 1758

 Score =  199 bits (505), Expect = 3e-49
 Identities = 98/181 (54%), Positives = 133/181 (73%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3    PPFYTTSNLLP---ESYNQGDSQGRKGTVIYTLMRSCGGKNEEIHKDAISIEGARIKTSD 173
            PPFYT+S  LP   +SY   +SQ RK T+ YT++RSC  K+E+  K+AI I   RIKTS+
Sbjct: 1342 PPFYTSSKALPSSMDSYGHWESQSRKRTITYTVLRSCDKKDEDAWKNAIYINEERIKTSE 1401

Query: 174  SGNLGCIQAKDRSTGRAEIASCVRVAEVAQVRVTSKEFAFYVADLAVGAELDLLIHYHDA 353
            S N+ CIQAKDRS+GR EIA+CVRV EV Q+R+T+++F F+V +LAV  EL + I YHD+
Sbjct: 1402 SNNIACIQAKDRSSGRMEIAACVRVTEVTQIRLTNQKFPFHVINLAVDTELHIPISYHDS 1461

Query: 354  LGNPFREAYDAVQIDADTNYPEVVSINSTRDSFGNIRLKAMRHGRALLRISMSNNQQKSD 533
            LGN F EA+D V    +TNYP++VS+N + +  G I LKA +HGRAL+++S+  N +KSD
Sbjct: 1462 LGNIFHEAHDVVLSYVETNYPDIVSVNYSSEDNGYIYLKARKHGRALVQVSIDKNPEKSD 1521

Query: 534  Y 536
            Y
Sbjct: 1522 Y 1522


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