BLASTX nr result

ID: Papaver22_contig00021635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021635
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    81   1e-13
ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|35549...    71   1e-10
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    70   2e-10
gb|AFK34264.1| unknown [Medicago truncatula]                           70   2e-10
ref|XP_003601620.1| F-box/kelch-repeat protein [Medicago truncat...    70   2e-10

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
 Frame = -3

Query: 527 SEVQVYRLGSGSWKSYDS---CIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLVS 357
           SEV+VY L   SW+       C+ Y  A    GVF NGALHW+    P ++ +   V + 
Sbjct: 178 SEVKVYSLRKQSWRRIGDMPYCVHYPGAN---GVFANGALHWVVGENPESNVANIVVALD 234

Query: 356 MDMEDGVFKEITQPEHMDDFDYKFVGVLRGXXXXXCSVSDAEFEIWQMTDYGVGESWSKV 177
           + +ED  ++E+ QPE+ D   Y  +GVLRG      +      ++W M +YGV ESW+K+
Sbjct: 235 LGVED--YREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKL 292

Query: 176 FKTDYPELTTMGIRSFRYIRRVVSLRNGEIFFEACDQHGVVDVVRTHLDEKK 21
           F     E+    I   R ++ +   ++G+   E   +H  +D+    L  K+
Sbjct: 293 FSVAQYEV----IGFLRSLKPLAYSKSGD---EVLIEHDNLDLCWYDLKRKQ 337


>ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|355498461|gb|AES79664.1|
           F-box protein [Medicago truncatula]
          Length = 422

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
 Frame = -3

Query: 527 SEVQVYRLGSGSWKSYDSC-------IAYRFARDEPGVFLNGALHWLASLGPGNDESQPR 369
           SEV+V+ LG   W++  S        + +R      G+ L+G ++WLA L       + R
Sbjct: 213 SEVKVFSLGGNCWRNIQSFPVIPLNGLNHRHTCLNNGMHLSGTVNWLAGLNDFYSIHEYR 272

Query: 368 --------VLVSMDMEDGVFKEITQPEHMDDFD--YKFVGVLRGXXXXXCSVSDAEFEIW 219
                   V++S+D+    +K++  P+  D+    +  + VL           D  F +W
Sbjct: 273 YITNVEDFVIISLDLSTETYKQLLLPQGFDEISAVWPVLMVLMDCLSFSYDTKDNGFVLW 332

Query: 218 QMTDYGVGESWSKVFKTDYPELTTMGIRSFRYIRRVVSLRNGEIFFEA---CDQHGVVDV 48
           QM +YGV ESWS++FK  Y  +    I+   Y + V   +NG++   A   C    V+  
Sbjct: 333 QMKEYGVQESWSQLFKISYQNVQDCCIKD--YYQTVCLYKNGDMVIFAKPQCSNQAVIYN 390

Query: 47  VR 42
           VR
Sbjct: 391 VR 392


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
 Frame = -3

Query: 530 LSEVQVYRLGSGSWKSYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLVSMD 351
           LSEVQ+  LG   W+S    ++YR  R   G  +NG LHW++   P  ++   R LVS D
Sbjct: 205 LSEVQILTLGCPEWRSLGK-VSYRLVRRASGALVNGRLHWISR--PCRNKPARR-LVSFD 260

Query: 350 MEDGVFKEITQPE--HMDDFDYKFVGVLRGXXXXXCSVSDAEFEIWQMTDYGVGESWSKV 177
           + D  F+E+++P+   ++  +Y  V VLRG        +    EIW M +Y V ESW K 
Sbjct: 261 LTDEQFREVSKPDCGGLNRCNYHLV-VLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKE 319

Query: 176 F 174
           +
Sbjct: 320 Y 320


>gb|AFK34264.1| unknown [Medicago truncatula]
          Length = 405

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/150 (28%), Positives = 80/150 (53%)
 Frame = -3

Query: 521 VQVYRLGSGSWKSYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLVSMDMED 342
           V+V+ +G+ SW+  +   ++ F  D  G+F+ G +HWL   GPG+     R +VS+D+ED
Sbjct: 225 VEVHTMGTSSWRRIEDFPSWSFIPDS-GIFVAGYVHWLTYDGPGSQ----REIVSLDLED 279

Query: 341 GVFKEITQPEHMDDFDYKFVGVLRGXXXXXCSVSDAEFEIWQMTDYGVGESWSKVFKTDY 162
             + E+  P+   + D   +G++        S ++   ++W M +YG  ESW+K+ K  Y
Sbjct: 280 ESYCEVLPPDL--ETDLWTLGLVWDYLCIFAS-NELFMDVWIMEEYGKKESWTKLCKVPY 336

Query: 161 PELTTMGIRSFRYIRRVVSLRNGEIFFEAC 72
            E  +  +R+F   +      +G++  +AC
Sbjct: 337 LEDQSPRLRAF--YKAFYLSEDGQVVLDAC 364


>ref|XP_003601620.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355490668|gb|AES71871.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 405

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/150 (28%), Positives = 80/150 (53%)
 Frame = -3

Query: 521 VQVYRLGSGSWKSYDSCIAYRFARDEPGVFLNGALHWLASLGPGNDESQPRVLVSMDMED 342
           V+V+ +G+ SW+  +   ++ F  D  G+F+ G +HWL   GPG+     R +VS+D+ED
Sbjct: 225 VEVHTMGTSSWRRIEDFPSWSFIPDS-GIFVAGYVHWLTYDGPGSQ----REIVSLDLED 279

Query: 341 GVFKEITQPEHMDDFDYKFVGVLRGXXXXXCSVSDAEFEIWQMTDYGVGESWSKVFKTDY 162
             + E+  P+   + D   +G++        S ++   ++W M +YG  ESW+K+ K  Y
Sbjct: 280 ESYCEVLPPDL--ETDLWTLGLVWDYLCIFAS-NELFMDVWIMEEYGKKESWTKLCKVPY 336

Query: 161 PELTTMGIRSFRYIRRVVSLRNGEIFFEAC 72
            E  +  +R+F   +      +G++  +AC
Sbjct: 337 LEDQSPRLRAF--YKAFYLSEDGQVVLDAC 364


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