BLASTX nr result

ID: Papaver22_contig00021568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021568
         (1638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168988.1| PREDICTED: methyl-CpG-binding domain-contain...    78   8e-12
ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...    73   3e-10
emb|CBI16127.3| unnamed protein product [Vitis vinifera]               70   2e-09
ref|XP_002314180.1| methyl binding domain protein [Populus trich...    69   4e-09
ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...    67   1e-08

>ref|XP_004168988.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
            [Cucumis sativus]
          Length = 206

 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 50/149 (33%), Positives = 74/149 (49%)
 Frame = -1

Query: 1401 GSSIDANGSGNLNPVTGNDTVPRQTLEDQNADYEDKDSKPDNMEDGVLQTPATPTVVIES 1222
            GS ID++ S   +P     TVP  TL  ++ D   +  +   +     ++P  P  +   
Sbjct: 62   GSFIDSSTS---SPTPATSTVPSPTLPSRDLD---RTPRKTPLTSSTRRSPLRPDPLNSF 115

Query: 1221 LAKSNSVKSWRRSGAVGTSLKLGVIEGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTD 1042
               S+  K    S +  +   L     ++ P WLP GW +E +VR +GA+AG +D  Y D
Sbjct: 116  NGDSSPSKKVSASNSASSKSAL-----SERPNWLPPGWVVEDRVRSSGATAGTVDKYYFD 170

Query: 1041 PEKGRKFWSKVGVLRYLETGTGRIRPKRL 955
            P   R+F SK+ VL +LETGT R R K L
Sbjct: 171  PVSNRRFRSKIEVLYFLETGTLRKRKKSL 199


>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like [Vitis
            vinifera]
          Length = 297

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 8/255 (3%)
 Frame = -1

Query: 1497 AKQIQAESTDNYSTPT---QARATTSKSYID--NQPYGSS---IDANGSGNLNPVTGNDT 1342
            A+ ++ +  DN  T +   QA     K+ +D    P   S   I+ N   N   + G +T
Sbjct: 47   AQTVKGKREDNLKTASYAPQASEDNHKNLVDPPEDPLLKSSCFIETNVVRNGETLIGAET 106

Query: 1341 VPRQTLEDQNADYEDKDSKPDNMEDGVLQTPATPTVVIESLAKSNSVKSWRRSGAVGTSL 1162
            V  QT    +A        PD   D        P++   S ++S S     R  A   + 
Sbjct: 107  VDLQTAS--HASQSCGVGAPDG--DSNWAGEVRPSLD-NSASQSESQPRRGRKRASEATA 161

Query: 1161 KLGVIEGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETG 982
             +  +E  D   WLP GW +E +VR +GASAG  D  + +P  GR+F SK  V  YLETG
Sbjct: 162  SMASVERED---WLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETG 218

Query: 981  TGRIRPKRLXXXXXXXXXXXXXXXXXXXSMPDFTDQAESGSQAQNLDADGFGSLNPLVGG 802
              R +PK+                     +PD      +GS      ++G+    P + G
Sbjct: 219  EVRKKPKKNPDNSPEKGTKSPPLNFNFEDVPDTVKWVRTGS------SEGW---TPFING 269

Query: 801  ETVTEQTVHDWDADF 757
            + V E +  DW A F
Sbjct: 270  QEVPESSKRDWAAAF 284


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 42/124 (33%), Positives = 59/124 (47%)
 Frame = -1

Query: 1128 EWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGTGRIRPKRLXX 949
            +WLP GW +E +VR +GASAG  D  + +P  GR+F SK  V  YLETG  R +PK+   
Sbjct: 8    DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD 67

Query: 948  XXXXXXXXXXXXXXXXXSMPDFTDQAESGSQAQNLDADGFGSLNPLVGGETVTEQTVHDW 769
                              +PD      +GS      ++G+    P + G+ V E +  DW
Sbjct: 68   NSPEKGTKSPPLNFNFEDVPDTVKWVRTGS------SEGW---TPFINGQEVPESSKRDW 118

Query: 768  DADF 757
             A F
Sbjct: 119  AAAF 122


>ref|XP_002314180.1| methyl binding domain protein [Populus trichocarpa]
            gi|222850588|gb|EEE88135.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 214

 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
 Frame = -1

Query: 1311 ADYEDKDSKPDNMEDGVLQT-----PATPTVVIESLAKSNSVKSWRRSGAVGTSLKLGVI 1147
            A +   D    N +D + Q      P T T  +E+L + N+     +        K    
Sbjct: 8    AQFPGTDQPVPNQDDALRQNGSVIDPNTRTTAVETLTRPNN--KGNQQPVTPVRAKRRSS 65

Query: 1146 EGADLPEWLPQGWKMERKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGT 979
            E      WLP GW +E ++R +GA+AG +D  Y DP  GRKF SK  V  YLETGT
Sbjct: 66   ETTIETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDVQYYLETGT 121


>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
            gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
            Full=Methyl-CpG-binding domain-containing protein 6;
            Short=AtMBD6; Short=MBD06; AltName:
            Full=Methyl-CpG-binding protein MBD6
            gi|8885544|dbj|BAA97474.1| unnamed protein product
            [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
            At5g59380 [Arabidopsis thaliana]
            gi|110743343|dbj|BAE99559.1| hypothetical protein
            [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
            methyl-CPG-binding domain 6 protein [Arabidopsis
            thaliana]
          Length = 225

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
 Frame = -1

Query: 1230 IESLAKSNSVKSWRRSGAVGTSLKLGVIEGADL----------------PEWLPQGWKME 1099
            ++S AK   ++        G S+++G+  G D                   WLP GW++E
Sbjct: 29   LDSSAKRRPIQGGIGISGSGESVRIGMANGTDQVNHQTESKSRKRAAPGDNWLPPGWRVE 88

Query: 1098 RKVRQNGASAGMIDAVYTDPEKGRKFWSKVGVLRYLETGTGRIRPKR 958
             K+R +GA+AG +D  Y +P  GRKF S+  VL YLE GT +   K+
Sbjct: 89   DKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKK 135


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