BLASTX nr result

ID: Papaver22_contig00021563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021563
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...    71   2e-10
emb|CBI32424.3| unnamed protein product [Vitis vinifera]               71   2e-10
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...    63   6e-08
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...    60   4e-07

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -3

Query: 735  VTFVFTNQVDGKLVPIES-MRSTPRGAEGNKTHVVTRMIQNQKSTSFLRQHAQPSPAISS 559
            VTFVFTNQVDGKLVP+ES +R+  +G E NK     R    QK T  L +H Q +P +S+
Sbjct: 814  VTFVFTNQVDGKLVPVESKVRANMQGVEANKNQSDKRGKLLQKPT-LLSKHQQSAPPVSN 872

Query: 558  TVNSNSSCKTPPGLSRPSLKGPTKFTKMSTQSTTPIPTKPRTSFGKQLPLKRL 400
              +S +S  +    S+P      K  + S + T  +  KP+ S G QLPLKRL
Sbjct: 873  KGDSITSISS--SSSKPFHLAGIKSMRTS-KGTPSVTLKPKLSIGSQLPLKRL 922


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -3

Query: 735  VTFVFTNQVDGKLVPIES-MRSTPRGAEGNKTHVVTRMIQNQKSTSFLRQHAQPSPAISS 559
            VTFVFTNQVDGKLVP+ES +R+  +G E NK     R    QK T  L +H Q +P +S+
Sbjct: 992  VTFVFTNQVDGKLVPVESKVRANMQGVEANKNQSDKRGKLLQKPT-LLSKHQQSAPPVSN 1050

Query: 558  TVNSNSSCKTPPGLSRPSLKGPTKFTKMSTQSTTPIPTKPRTSFGKQLPLKRL 400
              +S +S  +    S+P      K  + S + T  +  KP+ S G QLPLKRL
Sbjct: 1051 KGDSITSISS--SSSKPFHLAGIKSMRTS-KGTPSVTLKPKLSIGSQLPLKRL 1100


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 51/127 (40%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
 Frame = -3

Query: 735  VTFVFTNQVDGKLVPIESMRSTPR--GAEGNKTHVVTRMIQNQKSTSF-LRQHAQPSPAI 565
            VTFVF+NQVDGKLVP+ESM S+PR   AEGN  +  +R+ QN +   F L QH +P  +I
Sbjct: 809  VTFVFSNQVDGKLVPVESM-SSPRMKDAEGNGNN--SRLNQNSRQKPFLLSQHRKPLQSI 865

Query: 564  SSTVNSNSSCKTPPGLSRPSLKGPTKFTKMSTQSTTPIPT------------KPRTSFGK 421
            +S  + N              KG  KFT    QS T  P             K + S G 
Sbjct: 866  TSNEDPN--------------KGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGN 911

Query: 420  QLPLKRL 400
             LP KR+
Sbjct: 912  YLPQKRM 918


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 50/115 (43%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = -3

Query: 735  VTFVFTNQVDGKLVPIESMRSTPRGAE--GNKTHVVTRMIQNQKSTSFLRQHAQPSPAIS 562
            VTFVFTNQVDGKLVPIES  S P+  E  GN+     +  +N   TS L QH +   +IS
Sbjct: 819  VTFVFTNQVDGKLVPIESTAS-PKMLEIKGNQNQHDGK--ENMSRTSRLFQHQKLLQSIS 875

Query: 561  STVNSNSSCKTPPGLSRPSLKGPT-KFTKMSTQSTTPIPTKPRTSFGKQLPLKRL 400
            +   S  S +     S   L+G T K  + S + TT    K R S G QLP KR+
Sbjct: 876  A---SRDSLEETLSASFKPLEGATVKRRRTSLKGTTDSTLKSRLSSGTQLPFKRV 927


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