BLASTX nr result

ID: Papaver22_contig00021418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021418
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    81   1e-13
ref|XP_003611117.1| F-box protein [Medicago truncatula] gi|35551...    77   1e-12
ref|XP_003611124.1| F-box family protein [Medicago truncatula] g...    77   2e-12
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    75   4e-12

>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 22/183 (12%)
 Frame = +3

Query: 9   YNFCGSSNGLVCLNGCYDNEWVNYEPVYICNPITRECVFLPKFNRKPD--RSERLVTGFG 182
           +    S NGL+CL+     E     P+ ICNP+TRE   LP+     D   S R+  GFG
Sbjct: 259 FGIVNSCNGLLCLS-----ETSIGSPLVICNPVTREFTILPELTTTSDWFNSARVQAGFG 313

Query: 183 YVSSSNEYKVIRMYNLEKEPNS------VHVEVYTLGSGKGWRNLGKKFNKELQMFIWIS 344
           +   +NEYKVI M+N     ++      V +E++TLG+   WRN+  + + ++     ++
Sbjct: 314 FQPKTNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLGT-SSWRNV--EVDPQISFLKLLN 370

Query: 345 GVLLNGSLYWML----KDGKIAVFDLASETFSELP----------EGFPASWNVTLGVLG 482
              +NG+L+W++    +   I  F+  SE     P           GFP S  + LG L 
Sbjct: 371 PTCVNGALHWIIFEAWQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPHSMPIRLGELK 430

Query: 483 GYL 491
           G+L
Sbjct: 431 GFL 433


>ref|XP_003611117.1| F-box protein [Medicago truncatula] gi|355512452|gb|AES94075.1|
           F-box protein [Medicago truncatula]
          Length = 490

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
 Frame = +3

Query: 9   YNFCGSSNGLVCLNGCYDNEWVNYEPVYICNPITRECVFLPKFNRKPD----RSERLVTG 176
           +    S NGL+CL+     E     P+ ICNP+TRE   LP+     D       R+  G
Sbjct: 185 FGIVNSCNGLLCLS-----ETSIGSPLVICNPVTREFTILPELTTTSDWFNRARARVQAG 239

Query: 177 FGYVSSSNEYKVIRMYNLEKEPNS------VHVEVYTLGSGKGWRNLGKKFNKELQMFIW 338
           FG+   +NEYKVI M+N     N+      V +E++TLG+   WR +  + + ++     
Sbjct: 240 FGFQPKTNEYKVIIMWNKYVRRNNRLVFERVVLEIHTLGT-PSWRKV--EVDPQISFLKL 296

Query: 339 ISGVLLNGSLYWML----KDGKIAVFDLASETFSELP----------EGFPASWNVTLGV 476
           ++   +NG+L+W++    +   I  F+  SE     P           GFP S  + LG 
Sbjct: 297 LNPTCVNGALHWIIFETGQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPLSMPIRLGE 356

Query: 477 LGGYL 491
           L G+L
Sbjct: 357 LKGFL 361


>ref|XP_003611124.1| F-box family protein [Medicago truncatula]
           gi|355512459|gb|AES94082.1| F-box family protein
           [Medicago truncatula]
          Length = 551

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
 Frame = +3

Query: 9   YNFCGSSNGLVCLNGCYDNEWVNYEPVYICNPITRECVFLPKFNRKPD--RSERLVTGFG 182
           +    S NGL+CL+     E     P+ ICNP+TRE   LP+     D   S R+  GF 
Sbjct: 160 FGIVNSCNGLLCLS-----ETSIGSPLVICNPVTREFTILPELTTTSDWFNSARVQAGFS 214

Query: 183 YVSSSNEYKVIRMYNLEKEPNS------VHVEVYTLGSGKGWRNLGKKFNKELQMFIWIS 344
           +   +NEYKVI ++N     ++      V +E++TLG+   WRN+  + + ++     ++
Sbjct: 215 FQPKTNEYKVIIIWNKYVRRDNRLVFERVVLEIHTLGT-PSWRNV--EVDPQISFLKLLN 271

Query: 345 GVLLNGSLYWML----KDGKIAVFDLASETFSELP----------EGFPASWNVTLGVLG 482
              +NG+L+W++    +   I  F+  SE     P           GFP S  + LG L 
Sbjct: 272 PTCVNGALHWIIFEAWQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPHSMPIRLGELK 331

Query: 483 GYL 491
           G+L
Sbjct: 332 GFL 334


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = +3

Query: 81  EPVYICNPITRECVFLPKFNRKPDRSERLVTGFGYVSSSNEYKVIRMYNLEKEPNSVHVE 260
           +PV ICNPIT+E V LP  +R      R    FG+  SS +YKVIR Y      +    +
Sbjct: 135 DPVCICNPITKESVILP-LSRSKAHLVRHKLAFGFDQSSGKYKVIRDYRTSSNKHLSKFQ 193

Query: 261 VYTLGSGKGWRNLGKKFNKELQMFIWISGVLLNGSLYWMLK----DGKIAVFDLASETFS 428
           + TLG    WR L    N  L    W + V  NGSL+W++     D  I  FDL+SETF 
Sbjct: 194 IITLGE-SSWRQLNPPQN--LCTSDWDAAVFWNGSLHWIIDDKTIDEPILAFDLSSETFY 250

Query: 429 ELP 437
            +P
Sbjct: 251 TIP 253


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
 Frame = +3

Query: 9   YNFCGSSNGLVCLNGCYDNEWVNYEPVYICNPITRECVFLPKFNRKPDRSERLVTGFGYV 188
           +   GS NGL+CL      + +  + VY+ NP TR+   LPK  + PD  + +V GFGY 
Sbjct: 122 FEVVGSCNGLLCLA-----DSLFKDAVYVHNPFTRDFKQLPKSLQYPD--QEVVFGFGYH 174

Query: 189 SSSNEYKVIRMYNLEK-----------EPNSVHVEVYTLGSGKGWRNLGKKFNKELQMFI 335
             +  YKV+++                  +   V+V TLGS   WR+LGK      Q+  
Sbjct: 175 PMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGS-PTWRSLGK---VSYQLDR 230

Query: 336 WISGVLLNGSLYWMLKDGK-----IAVFDLASETFSELPE---GFPASWNVTLGVLGGYL 491
           W S  L+NG L+W+ +  +     I  FDLA E F E+P+   G  +  N  L VLGG L
Sbjct: 231 WPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCL 290


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