BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021391
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24961.3| unnamed protein product [Vitis vinifera]              178   2e-42
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   178   2e-42
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [...   150   3e-34
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165...   143   4e-32
dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis ...   143   4e-32

>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  178 bits (451), Expect = 2e-42
 Identities = 89/126 (70%), Positives = 107/126 (84%)
 Frame = +1

Query: 451 QEGARLEAARKKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 630
           +E A LEAAR+++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +SR RI  SYRRLV
Sbjct: 36  KEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLV 94

Query: 631 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 810
           VSIA  YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI  KS
Sbjct: 95  VSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKS 154

Query: 811 RTIRLP 828
           R IRLP
Sbjct: 155 RIIRLP 160


>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  178 bits (451), Expect = 2e-42
 Identities = 89/126 (70%), Positives = 107/126 (84%)
 Frame = +1

Query: 451 QEGARLEAARKKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 630
           +E A LEAAR+++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +SR RI  SYRRLV
Sbjct: 143 KEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLV 201

Query: 631 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 810
           VSIA  YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI  KS
Sbjct: 202 VSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKS 261

Query: 811 RTIRLP 828
           R IRLP
Sbjct: 262 RIIRLP 267


>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 389

 Score =  150 bits (380), Expect = 3e-34
 Identities = 75/126 (59%), Positives = 102/126 (80%)
 Frame = +1

Query: 451 QEGARLEAARKKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 630
           ++ AR+EAAR+++ A+T++ EPT  + AEA+ M++ ++++ + +  QSR RIT +YRRLV
Sbjct: 130 KDHARVEAARRRI-AETQEHEPTSKQLAEALRMRKKNVDKILCKGRQSRERITGNYRRLV 188

Query: 631 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 810
           +SIA  Y+GKGLSLQDL+QEGSIGLLRGAERFDP +G KLSTYVYWWIK+AII +I   S
Sbjct: 189 LSIANRYRGKGLSLQDLIQEGSIGLLRGAERFDPKRGNKLSTYVYWWIKEAIITSISINS 248

Query: 811 RTIRLP 828
           R +R P
Sbjct: 249 RIVRQP 254


>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
           gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
           polymerase sigma factor sigD, chloroplastic; Short=Sigma
           factor D; Short=Sigma-D; AltName: Full=RNA polymerase
           sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
           Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
           factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
           RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
           gi|9758039|dbj|BAB08700.1| sigma-like factor
           [Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
           factor 4 [Arabidopsis thaliana]
          Length = 419

 Score =  143 bits (361), Expect = 4e-32
 Identities = 75/135 (55%), Positives = 93/135 (68%)
 Frame = +1

Query: 424 KNISLVHFGQEGARLEAARKKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNR 603
           + + L  + +EGA+LE     L     + E      A   G K+ S    + R  ++R +
Sbjct: 127 EEVQLCLYLKEGAKLE----NLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKEAREK 182

Query: 604 ITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQA 783
           IT  YRRLVVSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQA
Sbjct: 183 ITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQA 242

Query: 784 IIRAIEQKSRTIRLP 828
           I+RAI  KSR ++LP
Sbjct: 243 ILRAIAHKSRLVKLP 257


>dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis thaliana]
           gi|16649075|gb|AAL24389.1| sigma-like factor
           [Arabidopsis thaliana] gi|21387209|gb|AAM48008.1|
           sigma-like factor [Arabidopsis thaliana]
          Length = 267

 Score =  143 bits (361), Expect = 4e-32
 Identities = 75/135 (55%), Positives = 93/135 (68%)
 Frame = +1

Query: 424 KNISLVHFGQEGARLEAARKKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNR 603
           + + L  + +EGA+LE     L     + E      A   G K+ S    + R  ++R +
Sbjct: 127 EEVQLCLYLKEGAKLE----NLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKEAREK 182

Query: 604 ITLSYRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQA 783
           IT  YRRLVVSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQA
Sbjct: 183 ITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQA 242

Query: 784 IIRAIEQKSRTIRLP 828
           I+RAI  KSR ++LP
Sbjct: 243 ILRAIAHKSRLVKLP 257