BLASTX nr result

ID: Papaver22_contig00021381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021381
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   139   3e-31
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   139   3e-31
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   133   2e-29
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   132   4e-29

>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  139 bits (349), Expect = 3e-31
 Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
 Frame = -3

Query: 509 GATTFQLSGLNDFELYKTLEVQKLAEAISMLRFRTPSWRAKHPYVLVDRFEDVTPPEKLH 330
           GA  F LSGL   + Y   EV  LA  IS+++F+  SWR  HPYVLVDRFEDVTPPE++H
Sbjct: 218 GAKLFYLSGLVHGK-YPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVH 276

Query: 329 KDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFRLDSVRSTADPFPLSSE------MEM 168
            +  C RNI+LYGYLRGCNLK G KVH+AGVGDF L SV + ADP PL S        + 
Sbjct: 277 TNNKCDRNITLYGYLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDK 336

Query: 167 EIDFFEPVHRRKKRL--KTGTYLRLEVHNVPFGMV 69
           E  F+ P+      L  K   Y+ +  H V +  V
Sbjct: 337 EKLFYAPMSGLGDLLYDKDAVYININDHFVQYSKV 371


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score =  139 bits (349), Expect = 3e-31
 Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
 Frame = -3

Query: 509 GATTFQLSGLNDFELYKTLEVQKLAEAISMLRFRTPSWRAKHPYVLVDRFEDVTPPEKLH 330
           GA  F LSGL   + Y   EV  LA  IS+++F+  SWR  HPYVLVDRFEDVTPPE++H
Sbjct: 218 GAKLFYLSGLVHGK-YPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVH 276

Query: 329 KDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFRLDSVRSTADPFPLSSE------MEM 168
            +  C RNI+LYGYLRGCNLK G KVH+AGVGDF L SV + ADP PL S        + 
Sbjct: 277 TNNKCDRNITLYGYLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDK 336

Query: 167 EIDFFEPVHRRKKRL--KTGTYLRLEVHNVPFGMV 69
           E  F+ P+      L  K   Y+ +  H V +  V
Sbjct: 337 EKLFYAPMSGLGDLLYDKDAVYININDHFVQYSKV 371



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 EIDFFEPVHRRK-KRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGISHEEENVG 3
           E+D  +   R K +  ++GTY+RLEVH V   MV++FDPC PILVGGI   E++ G
Sbjct: 779 ELDNIDEAFRLKIEGFQSGTYVRLEVHGVSCEMVEHFDPCQPILVGGIGPGEDDAG 834


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  133 bits (335), Expect = 1e-29
 Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
 Frame = -3

Query: 512 EGATTFQLSGLNDFELYKTLEVQKLAEAISMLRFRTPSWRAKHPYVLVDRFEDVTPPEKL 333
           +GA  F LSGL   +  K  E+  LA  IS+++F   SWR  HPYVL DRFEDVTPPE++
Sbjct: 213 DGAKLFYLSGLIHGKYVKR-EIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPERV 271

Query: 332 HKDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFRLDSVRSTADPFPLSSE------ME 171
             D  C RNI+LYGYLRGCNLK G KVH+AGVGD+ L  V + ADP PL S        +
Sbjct: 272 RVDNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKKKGLRD 331

Query: 170 MEIDFFEPVHRRKKRL--KTGTYLRLEVHNVPFGMVKN 63
            E  F+ P+      +  K   Y+ +  H V +  V N
Sbjct: 332 KEKLFYAPMSGLGDLVYDKDAVYININDHFVQYSNVDN 369



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
 Frame = -3

Query: 269 KSGAKVHLAGVGD----------FRLDSVRSTADPFPLSSEMEMEIDFFEPVHRRKKRLK 120
           K GAK H     +            +   R+ A+   L  E  +EI+ F+          
Sbjct: 729 KHGAKFHRGQANESGYIDKLKEEIEIRKQRNIAELNDLDEETRLEIEGFQ---------- 778

Query: 119 TGTYLRLEVHNVPFGMVKNFDPCHPILVGGISHEEENVG 3
           TGTYLRLE+H+VPF MV++FDPC PILVGGI   EE+VG
Sbjct: 779 TGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVG 817


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  133 bits (334), Expect = 2e-29
 Identities = 74/156 (47%), Positives = 93/156 (59%), Gaps = 8/156 (5%)
 Frame = -3

Query: 512 EGATTFQLSGLNDFELYKTLEVQKLAEAISMLRFRTPSWRAKHPYVLVDRFEDVTPPEKL 333
           +GA  F LSGL   + Y   E+  LA  IS+++F   SWR  HPYVLVDRFEDVTPPE++
Sbjct: 216 DGAKLFYLSGLIHGK-YPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQV 274

Query: 332 HKDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFRLDSVRSTADPFPLSSE------ME 171
           H +    RN++LYGYLRGCNLK G KVH+AGVGD+ L  V + ADP PL S        +
Sbjct: 275 HMNRKSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRD 334

Query: 170 MEIDFFEPVHRRKKRL--KTGTYLRLEVHNVPFGMV 69
            E  F+ P+      L  K   Y+ +  H V F  V
Sbjct: 335 KEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKV 370



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
 Frame = -3

Query: 362  FEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFR-------LDSVRST 204
            FED+   E+     +CK++ S  G L   +     +V     G F        L   R+ 
Sbjct: 663  FEDLETGERYE---SCKKDESGNGALEKEDEPKFHRVQANESGYFEKLKEEIELQKQRNI 719

Query: 203  ADPFPLSSEMEMEIDFFEPVHRRKKRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGIS 24
            A+   L     +EI+ F+          TGTY+RLEVH+VPF MV++FDPCHPILVGGI 
Sbjct: 720  AELNDLDEVTRLEIEGFQ----------TGTYVRLEVHDVPFEMVEHFDPCHPILVGGIG 769

Query: 23   HEEENVG 3
              EENVG
Sbjct: 770  FGEENVG 776


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  132 bits (331), Expect = 4e-29
 Identities = 74/156 (47%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
 Frame = -3

Query: 512 EGATTFQLSGLNDFELYKTLEVQKLAEAISMLRFRTPSWRAKHPYVLVDRFEDVTPPEKL 333
           +GA  F LSGL   + Y   E+  LA  IS+++F   SWRA HPY+LVDRFEDVTPPE++
Sbjct: 216 DGAKLFYLSGLVHGK-YPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERV 274

Query: 332 HKDANCKRNISLYGYLRGCNLKSGAKVHLAGVGDFRLDSVRSTADPFPLSSE------ME 171
             +  C RNI+LYGYLRGCNLK G KVH+AGVGD  L  V   ADP PL S        +
Sbjct: 275 QLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRD 334

Query: 170 MEIDFFEPVHRRKKRL--KTGTYLRLEVHNVPFGMV 69
            +  F+ P+      L  K   Y+ +  H V F  V
Sbjct: 335 RDKLFYAPMSGLGDLLYDKDAVYININDHLVQFSNV 370



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -3

Query: 161 DFFEPVHRRKKRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGISHEEENVG 3
           D  E      +  +TGTYLRLEVH+VPF MV++FDP HP+LVGGI   EENVG
Sbjct: 724 DLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVG 776


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