BLASTX nr result

ID: Papaver22_contig00021321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021321
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299838.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   143   4e-32
ref|XP_004147276.1| PREDICTED: DNA-directed RNA polymerases I an...   137   3e-30
ref|XP_002449364.1| hypothetical protein SORBIDRAFT_05g008640 [S...   135   1e-29
ref|XP_004145267.1| PREDICTED: DNA-directed RNA polymerases I an...   134   2e-29

>ref|XP_002299838.1| predicted protein [Populus trichocarpa] gi|222847096|gb|EEE84643.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score =  143 bits (360), Expect = 4e-32
 Identities = 71/97 (73%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
 Frame = +1

Query: 97  MEHGT-RDIKSSTFCLTDEDHTLANALRFTLNQDPRVVFCGYSIPHPSDAQVNIRVQTTG 273
           MEHG+ RD  S+TFC  DEDHTLAN++RF LNQDPRV FCGYSIPHPSDA+VNIRVQTTG
Sbjct: 1   MEHGSVRDPSSATFCFVDEDHTLANSVRFALNQDPRVSFCGYSIPHPSDAKVNIRVQTTG 60

Query: 274 AHAGVVLKDALQNLRAMCQHIRSTMDGAVKDYKLENP 384
             A  VLKDA QNL  MCQH+RST+D AV DY+  NP
Sbjct: 61  DPAREVLKDACQNLMVMCQHVRSTLDKAVDDYR-SNP 96


>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  143 bits (360), Expect = 4e-32
 Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
 Frame = +1

Query: 97  MEHGT-RDIKSSTFCLTDEDHTLANALRFTLNQDPRVVFCGYSIPHPSDAQVNIRVQTTG 273
           MEHG+  D   STF L+DEDHTLAN++RFTLNQDPRV FCGYSIPHPSDA+VNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 274 AHAGVVLKDALQNLRAMCQHIRSTMDGAVKDYKLENPPVEAMETEE 411
             A  VLKDA Q+L  MCQH+RST D AV DYK+ + PV+ M  E+
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKM-SKPVKDMSIEK 105


>ref|XP_004147276.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Cucumis sativus]
          Length = 104

 Score =  137 bits (344), Expect = 3e-30
 Identities = 68/97 (70%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = +1

Query: 97  MEHGT-RDIKSSTFCLTDEDHTLANALRFTLNQDPRVVFCGYSIPHPSDAQVNIRVQTTG 273
           MEHG+  D   STF + DEDHTLAN LR+TLNQDPRV FCGYSIPHPSD +VNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSMADEDHTLANTLRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 274 AHAGVVLKDALQNLRAMCQHIRSTMDGAVKDYKLENP 384
             A  VLKDA QNL  +CQH+R+T D AV D KL NP
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDVKLTNP 97


>ref|XP_002449364.1| hypothetical protein SORBIDRAFT_05g008640 [Sorghum bicolor]
           gi|241935207|gb|EES08352.1| hypothetical protein
           SORBIDRAFT_05g008640 [Sorghum bicolor]
          Length = 107

 Score =  135 bits (339), Expect = 1e-29
 Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
 Frame = +1

Query: 97  MEHGT-RDIKSSTFCLTDEDHTLANALRFTLNQDPRVVFCGYSIPHPSDAQVNIRVQTTG 273
           MEHG+  D  SSTF + +EDHTLAN+ RF LNQDPRV FCGYSIPHP++ +VNIRVQTTG
Sbjct: 1   MEHGSLTDSTSSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG 60

Query: 274 AHAGVVLKDALQNLRAMCQHIRSTMDGAVKDYKLENPPVEAMETE 408
             A  VLKDALQNL  MCQH+R T+D AV +++ +N   E M+ +
Sbjct: 61  DAAKDVLKDALQNLMIMCQHVRGTLDNAVANHRAKNTTAEQMDVD 105


>ref|XP_004145267.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Cucumis sativus]
           gi|449516242|ref|XP_004165156.1| PREDICTED: DNA-directed
           RNA polymerases I and III subunit RPAC2-like isoform 1
           [Cucumis sativus] gi|449516244|ref|XP_004165157.1|
           PREDICTED: DNA-directed RNA polymerases I and III
           subunit RPAC2-like isoform 2 [Cucumis sativus]
          Length = 108

 Score =  134 bits (336), Expect = 2e-29
 Identities = 67/97 (69%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = +1

Query: 97  MEHGT-RDIKSSTFCLTDEDHTLANALRFTLNQDPRVVFCGYSIPHPSDAQVNIRVQTTG 273
           MEHG+  D   STF + DEDHTLANALR TLNQDPRV FCGYSIPHPSD +VNIRVQTTG
Sbjct: 1   MEHGSFTDETKSTFSMADEDHTLANALRCTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 274 AHAGVVLKDALQNLRAMCQHIRSTMDGAVKDYKLENP 384
             A  VLKDA QNL  +CQH+R+T D AV D+ L  P
Sbjct: 61  DPAREVLKDACQNLMVVCQHVRNTFDKAVLDFNLTKP 97


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