BLASTX nr result

ID: Papaver22_contig00021280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021280
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]               70   9e-10
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...    70   9e-10
ref|XP_002330842.1| predicted protein [Populus trichocarpa] gi|2...    67   9e-09
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...    65   4e-08
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor...    64   5e-08

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 34/56 (60%), Positives = 47/56 (83%)
 Frame = -2

Query: 170 EIWVSDKLMSIVNFSQATVIQYVIGLAKQASSASDLNTKLVEFANLPSTTETRKFA 3
           ++WVSDKLMS++ +SQ T++QYV+GLAKQASS +D+  KLVEF  L +++ETR FA
Sbjct: 8   KVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEF-GLSASSETRSFA 62


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 34/56 (60%), Positives = 47/56 (83%)
 Frame = -2

Query: 170 EIWVSDKLMSIVNFSQATVIQYVIGLAKQASSASDLNTKLVEFANLPSTTETRKFA 3
           ++WVSDKLMS++ +SQ T++QYV+GLAKQASS +D+  KLVEF  L +++ETR FA
Sbjct: 8   KVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEF-GLSASSETRSFA 62


>ref|XP_002330842.1| predicted protein [Populus trichocarpa] gi|222872664|gb|EEF09795.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 549 FAELHDLVDKVTSAELLSPTLIVIGKVVALSPLWPLSSK 665
           FAEL+DL DKV   EL+SPTLI+IGKVVALSPLWPLSSK
Sbjct: 326 FAELNDLADKVAREELVSPTLIIIGKVVALSPLWPLSSK 364


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 30/54 (55%), Positives = 43/54 (79%)
 Frame = -2

Query: 164 WVSDKLMSIVNFSQATVIQYVIGLAKQASSASDLNTKLVEFANLPSTTETRKFA 3
           WVSDKLMSI+ +SQ+TV+QY+IG++KQA+S +D+  KL EF    ++ ETR F+
Sbjct: 9   WVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEF-GFSTSAETRSFS 61


>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Cucumis sativus]
          Length = 1055

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = -2

Query: 164 WVSDKLMSIVNFSQATVIQYVIGLAKQASSASDLNTKLVEFANLPSTTETRKFA 3
           WVSD+LMS++ FSQ T++QY+IGL+KQA+S +D+  KLV   +LPS+ ET  FA
Sbjct: 10  WVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETLAFA 63


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