BLASTX nr result

ID: Papaver22_contig00021000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00021000
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    83   1e-13
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    80   1e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    79   2e-12
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
 Frame = -3

Query: 982 CNGLVCINLMSRHGFEDPIYICNPLTREYIYLDKFNQDCKFQDSMFTGFGYLSQTDEYKV 803
           CNGL+C+   S   F D +YI NP T  Y  L K  Q    Q+ +F GFG+  +T+EYKV
Sbjct: 127 CNGLLCL---SDSLFNDSLYIYNPFTGRYKELPKSLQ-YPDQEVVF-GFGFNPKTNEYKV 181

Query: 802 VRIFKCQD-------------LTAQVQVYTLGDGIGWRDKGELD-MLLQSEPGIFVNGSL 665
           +RI   ++               +QVQ+ TLG   GWR  G++   L++      VNG L
Sbjct: 182 IRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCP-GWRSLGKVSYRLVRRASETLVNGRL 240

Query: 664 YWFE--CLE---QKIVAFDLASEVFQVIQSPTCLDSTSNSYTXXXXXXXXXXLAYQDPYG 500
           +W    C     +++V+FDL  E F+ +  P C       Y             Y + YG
Sbjct: 241 HWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCN-YG 299

Query: 499 PLELWLYREEKDSGCGTNDKKHCFWSKEYMI-ASETKGL-------------------YA 380
            LE+W+ +E        N K+   W KEY I A   KGL                     
Sbjct: 300 RLEIWVMKE-------YNVKES--WVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVR 350

Query: 379 PVALTERGEILL-WTGKILCCYDPKTACLVELASCSDMSKSFRQGQIVLHMNS 224
            + + + GEILL +  + L  YDPK     ++    D+  + +  Q V+H+ S
Sbjct: 351 ALCVLKNGEILLEYKNRALVSYDPKKGKFKDI----DLQGTPKWFQTVVHVGS 399


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 80/266 (30%), Positives = 118/266 (44%), Gaps = 41/266 (15%)
 Frame = -3

Query: 982 CNGLVCINLMSRHGFEDPIYICNPLTREYIYLDKFNQDCKFQDS-MFTGFGYLSQTDEYK 806
           CNGL+C+   S   + D +YI NP T  Y  L K  Q   + D  + +GFG+  +T EYK
Sbjct: 128 CNGLLCL---SDSLYNDSLYIYNPFTGCYKELPKSLQ---YPDQEVVSGFGFNPKTKEYK 181

Query: 805 VVRIFKCQD-------------LTAQVQVYTLGDGIGWRDKGELD-MLLQSEPGIFVNGS 668
           V+RI   ++               ++VQ+ TLG    WR  G++   L++   G  VNG 
Sbjct: 182 VIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCP-EWRSLGKVSYRLVRRASGALVNGR 240

Query: 667 LYWFE--CLE---QKIVAFDLASEVFQVIQSPTCLDSTSNSYTXXXXXXXXXXLAYQDPY 503
           L+W    C     +++V+FDL  E F+ +  P C      +Y             Y + Y
Sbjct: 241 LHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCN-Y 299

Query: 502 GPLELWLYREEKDSGCGTNDKKHCFWSKEYMI-ASETKGL-------------------Y 383
           G LE+W+ +E        N K+   W KEY I A   KGL                    
Sbjct: 300 GRLEIWVMKE-------YNVKES--WVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVV 350

Query: 382 APVALTERGEILL-WTGKILCCYDPK 308
             + + + GEILL +  ++L  YDPK
Sbjct: 351 GALCVLKNGEILLEYKNRVLVSYDPK 376


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 39/264 (14%)
 Frame = -3

Query: 982 CNGLVCINLMSRHGFEDPIYICNPLTREYIYLDKFNQDCKFQDSMFTGFGYLSQTDEYKV 803
           CNGL+C+   +   F+D +Y+ NP TR++  L K  Q    Q+ +F GFGY   T+ YKV
Sbjct: 128 CNGLLCL---ADSLFKDAVYVHNPFTRDFKQLPKSLQ-YPDQEVVF-GFGYHPMTEVYKV 182

Query: 802 VRIFKCQD-------------LTAQVQVYTLGDGIGWRDKGELDMLLQSEPG-IFVNGSL 665
           V++   ++               ++VQV TLG    WR  G++   L   P    VNG L
Sbjct: 183 VKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQLDRWPSEALVNGRL 241

Query: 664 YWF----ECLEQKIVAFDLASEVFQVIQSPTCLDSTSNSYTXXXXXXXXXXLAYQDPYGP 497
           +W       + + IV+FDLA E F+ I  P C   +  +Y             ++   G 
Sbjct: 242 HWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVHRS-NGK 300

Query: 496 LELWLYREEKDSGCGTNDKKHCFWSKEYMIASE-TKGLYAPV------------------ 374
           LE+W+ +E         D K   W KE+ I +   KGL   V                  
Sbjct: 301 LEVWVMKE--------YDVKES-WIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRL 351

Query: 373 -ALTERGEILL-WTGKILCCYDPK 308
             L + GEILL + G++L  Y+P+
Sbjct: 352 LCLLKNGEILLEYKGRVLVSYNPE 375


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = -3

Query: 982 CNGLVCINLMSRHGFEDPIYICNPLTREYIYLDKFNQDCKFQDSMFTGFGYLSQTDEYKV 803
           CNGL+C+   S    +  +++CNP+  EYI +   N D KF+  +   FG+ S +++YKV
Sbjct: 140 CNGLLCLYEDSGDKSDMMVHVCNPVLGEYIDIPVVNTDKKFEHHL--AFGFSSVSNQYKV 197

Query: 802 VRIFKCQ-DLTAQ---VQVYTLGDGIGWRDKGELDMLLQS-EPGIFVNGSLYWFECLEQK 638
           ++ F  + DLTA     ++YT+G G  WR  G     LQS +   F++ S++W E     
Sbjct: 198 LQTFYPEKDLTAAPCLAEIYTVGTG-QWRSIGNASFRLQSLDANAFLHDSIHWIEYRSNS 256

Query: 637 I---VAFDLASEVFQVIQSP 587
           I    AFD  SE F+++  P
Sbjct: 257 IGFVSAFDFVSEQFKLVALP 276


>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 16/298 (5%)
 Frame = -3

Query: 982 CNGLVCINLMSRHGFEDPIYICNPLTREYIYL-DKFNQDCKFQDSMFTGFGYLSQTDEYK 806
           CNGL+CI+   + G  D IY+CNP+  EYI +     Q+ + Q +     GY +   EYK
Sbjct: 96  CNGLLCISQTFQDGSHDDIYLCNPILGEYISIPPAAGQETRHQSNF--ALGYCAIAKEYK 153

Query: 805 VVRIFKCQD---LTAQVQVYTLGDGIGWRD-KGELDMLLQSEPGIFVNGSLYW-----FE 653
           V+  F  +       + ++YT+G G  WR  +  L  L       FV GS++W      +
Sbjct: 154 VLHTFCSKTGSYYQPEAEIYTIGTG-KWRSIQKALLNLRMFIVDSFVCGSIHWELRDEDD 212

Query: 652 CLEQKIVAFDLASEVFQVIQSPTCLDSTSNSYT-XXXXXXXXXXLAYQDPYGPLELWLYR 476
           C+   I +F+  +E F  +  P   D    + T             Y DP    E+W+ +
Sbjct: 213 CV-NSIGSFNFENEQFSELSLPPRYDEGDVTLTAFEGCLGVSFFHTYSDP--QYEIWIMK 269

Query: 475 E--EKDSGCGTNDKKHCFWSKEYMIAS-ETKGLYAPVALTERGEILLWT-GKILCCYDPK 308
           E   K+S           W+K++ + +     LY P+     G IL+    + + CYD +
Sbjct: 270 EYGNKES-----------WTKQFTVKNLGFAKLYDPLIFLNNGLILMMQYREFVVCYDTR 318

Query: 307 TACLVELASCSDMSKSFRQGQIVLHMNSFVSLKALGE-KFAKISRRQCDQLLESSTSK 137
              +  +        ++       +  SFVSLK +G+ +  K+SR+Q  +  + S+S+
Sbjct: 319 RKFMEIIRIWQTQGNNY----ATAYKPSFVSLKDVGKGEQLKMSRKQAGREDDESSSE 372


Top