BLASTX nr result

ID: Papaver22_contig00020964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020964
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003627635.1| F-box protein [Medicago truncatula] gi|35552...    59   6e-07
ref|XP_003598382.1| F-box protein [Medicago truncatula] gi|35548...    59   6e-07
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               59   6e-07
ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-07

>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = -1

Query: 506 VNGALYWKALIGGDLGTDNILRFDFEKEEFDQLPIPDVGNHGNNQACLCVLGGSL---WF 336
           V G+++W+ L G D   ++I  F+FE E+F QL +P   + G     L V  G L   +F
Sbjct: 233 VCGSIHWE-LRGEDNCVNSIGSFNFENEQFSQLSLPPRYDEGG--VTLTVFEGCLGVSFF 289

Query: 335 LNEYGCSLEFWELKDNGVEKSWIHPFTFEKDKFDDMEELTPLWLLENGKILFGVHDDHAS 156
                   E W +K+ G ++SW   FT +   F++     PL  L NG IL  + D+H  
Sbjct: 290 NTCCETQFEIWVMKEYGNKQSWTKQFTVKNLGFEN--HYQPLIFLNNGLIL--MMDNHE- 344

Query: 155 LRFVLYDPEHETTRTLKTCE 96
            RFV+YD   +  + ++ C+
Sbjct: 345 -RFVIYDTRRKFMKVIRICQ 363


>ref|XP_003627635.1| F-box protein [Medicago truncatula] gi|355521657|gb|AET02111.1|
           F-box protein [Medicago truncatula]
          Length = 372

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
 Frame = -1

Query: 503 NGALYWKALIGGDLGTDNILRFDFEKEEFDQLPIPDVGNHGNNQACLCVLGG--SLWFLN 330
           NGA++W A     +  + I+ FD  + +  ++P+PD  +HG     L V G   SLW +N
Sbjct: 221 NGAIHWLASPYHKIPLEVIVVFDLMERKLLEIPLPDDYDHGPEHYGLWVFGKFLSLWNMN 280

Query: 329 EYGCSLEFWELKDNGVEKSWIHPFTFEKDKFDDMEELTPLWLLENGKILFGVHDDHASLR 150
               ++E WE+K+   + SW        D  +D+   +P++  ++G I   +   +  L 
Sbjct: 281 FDNRTVEIWEMKEYKQQSSWTKTLVIPID--NDIPWFSPVYSTKSGDI---IGTSNIGLG 335

Query: 149 FVLYDPEHETTRTLKTCEGIAASSLAT-TSVYVESLISLDTG 27
            V Y+ + +        E  A +S+A+  ++Y ESL+SL  G
Sbjct: 336 LVKYNNKGQ------LLEYFAMNSIASEVAMYTESLLSLPGG 371


>ref|XP_003598382.1| F-box protein [Medicago truncatula] gi|355487430|gb|AES68633.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
 Frame = -1

Query: 506 VNGALYWKALIGGDLGTDNILRFDFEKEEFDQLPIPDVGNHGNN------QACLCVLGGS 345
           V+G + W A        D I+  D EKE + +L +PD  N  N+      + CLCV   S
Sbjct: 244 VSGTVNWFAY-------DVIISLDLEKESYQKLRLPDFDNENNSWDVGVVRDCLCVFASS 296

Query: 344 LWFLNEYGCSLEFWELKDNGVEKSWIHPFTFEKDKFDDMEELTPLWLLENGKILFGVHDD 165
               +EY    + W +K+ G ++SW   +T    +  D+E    L++ E+ ++L   H D
Sbjct: 297 ----DEYW---DVWIMKEYGNQESWTKLYTIPNLQDQDLEADRALYISEDDQLLVQCHQD 349

Query: 164 HA---SLRFVLYDPEHETTRTLKTCEGIAASSLATTSVYVESLIS 39
            A    ++ V+YD +  T            +      VY+ESLIS
Sbjct: 350 WAECDDMKLVVYDSKAGTLNFPVFRNNYKHTH---AEVYIESLIS 391


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
 Frame = -1

Query: 536 YNRPDMCRLPVNGALYWKALIGGDL-GTDN-ILRFDFEKEEFDQLPIPDVGNHGNNQACL 363
           Y   ++ R  +NGAL+W A    ++  TDN IL FD  K+ F ++ +PD G     + CL
Sbjct: 213 YIHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKEIMLPDFGYDELIRKCL 272

Query: 362 CVLGGSL--WFLNEYGC--SLEFWELKDNGVEKSWIHPFTFEKDKFDDMEELTPLWLLEN 195
               GSL   F + Y    + + W +++ GV KSW   FT       ++E + P    +N
Sbjct: 273 ADYKGSLSVLFYDAYHSNENCDVWVMEEYGVAKSWTKHFTIR----HEIEIIIPFEFFDN 328

Query: 194 GKILFGVHDDHASLRFVLYDPEHETTRTLKTCEGIAASSLATTSVYVESLIS 39
           G+ +        S  F+ ++P+    R L        S  A    Y+ESL+S
Sbjct: 329 GEAIL---QKKKSGGFISWNPDGIRFRDL------GVSGPARLVEYMESLVS 371


>ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|222853856|gb|EEE91403.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
 Frame = -1

Query: 503 NGALYWKALIG-GDLGTDNILRFDFEKEEFDQLPIPDVGNHGNNQACLCVLGG--SLWFL 333
           N  L WKA IG G  G   I+ +D  KEEF ++P P V  +      + V  G  S ++L
Sbjct: 220 NDFLIWKATIGLGRTGRYLIVSYDMSKEEFKEIPQPIVNYNDELHMEVSVFDGLLSTFYL 279

Query: 332 NEYGCSLEFWELKDNGVEKSW----IHPFTFEKDKFDDMEELTPLWLLENGKILFGVHDD 165
           ++Y      W +K+ GV  SW    +    +  + ++ +  L PL +L+NG+IL     +
Sbjct: 280 SKYD-EAHIWSMKEYGVTDSWELRVVIKLPWRVENYNYI-FLKPLTILKNGEILI----E 333

Query: 164 HASLRFVLYDPEHETTRTLKTCEGIAASSLATTSVYVESLIS 39
                 +L+DP+ ++ R +    G+    L T    V SL+S
Sbjct: 334 AGEKARILHDPKKDSYRIINPIRGVPRRFLVTP--IVGSLVS 373


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