BLASTX nr result

ID: Papaver22_contig00020901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020901
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...    74   6e-11
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...    74   8e-11
ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotei...    72   2e-10
ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotei...    72   2e-10
ref|YP_004035850.1| hypothetical protein Hbor_08140 [Halogeometr...    68   3e-09

>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 56/146 (38%)
 Frame = -3

Query: 690 EGVRSRDKDSD------------------YDRVESKHKRSRHSERDRDTER---ESGHG- 577
           E  + +D+D D                  YD +ESKH+R RH ERDRD E    E  HG 
Sbjct: 358 EKEKEKDRDKDYDAGEPNYDRGRSRDKEYYDHMESKHERERHGERDRDLEHAGPEDDHGW 417

Query: 576 ------------------------------YDHLEPQGDRDRYDA----EQDRYDQMEPE 499
                                         YDHL+ QGD D YD     ++DRY+QM+ +
Sbjct: 418 YEQPEHGHRRPEAEHDDEHYKHYDHQARGQYDHLDAQGDHDLYDRHADNDRDRYNQMDED 477

Query: 498 NYEDVRATSESCERERTRDYGRDYEQ 421
           NY    A  +S ER+RTRD  R+Y +
Sbjct: 478 NYHYDHAAYDSRERDRTRDLEREYRR 503


>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 29/116 (25%)
 Frame = -3

Query: 681 RSRDKDSDYDRVESKHKRSRHSERDRDTER---ESGHG------------------YDHL 565
           RS D+D DYDRVESK+++ RH +RDRD +R   E G G                  YDH 
Sbjct: 382 RSHDRD-DYDRVESKYEKDRHGDRDRDVDRAETEDGRGWYDQPEHGHRDADHDPQYYDHF 440

Query: 564 EPQGDRDRYD-----AEQDRYDQME---PENYEDVRATSESCERERTRDYGRDYEQ 421
           E    R +YD      +QDRYDQ +    ++Y   R  SES +RER+RD   +Y++
Sbjct: 441 EHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKR 496


>ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Glycine max]
          Length = 465

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
 Frame = -3

Query: 681 RSRDKDSDYDRVESKHKRSRHS---ERDRDTERESGHGYDHLEPQGDRDRY------DAE 529
           RSRD++SDYDRVESKH    H    E DR    +  HG  H +P  D +RY      D  
Sbjct: 354 RSRDRESDYDRVESKHGERNHDYEPEDDRGRHNQYEHGRRHADPDHDPERYDHYNHGDDH 413

Query: 528 QDRYDQME-----PENYEDVRATSESCERERTRDYGRDYEQ 421
            D Y+Q        ++Y   RATSES E+ER+ D  R+Y++
Sbjct: 414 GDHYNQYRDHDGMEDDYHAGRATSESHEKERSHDVDREYQR 454


>ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Glycine max]
          Length = 482

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
 Frame = -3

Query: 681 RSRDKDSDYDRVESKHKRSRHS---ERDRDTERESGHGYDHLEPQGDRDRY------DAE 529
           RSRD++SDYDRVESKH    H    E DR    +  HG  H +P  D +RY      D  
Sbjct: 371 RSRDRESDYDRVESKHGERNHDYEPEDDRGRHNQYEHGRRHADPDHDPERYDHYNHGDDH 430

Query: 528 QDRYDQME-----PENYEDVRATSESCERERTRDYGRDYEQ 421
            D Y+Q        ++Y   RATSES E+ER+ D  R+Y++
Sbjct: 431 GDHYNQYRDHDGMEDDYHAGRATSESHEKERSHDVDREYQR 471


>ref|YP_004035850.1| hypothetical protein Hbor_08140 [Halogeometricum borinquense DSM
           11551] gi|312291951|gb|ADQ66411.1| conserved
           hypothetical protein TIGR00299 [Halogeometricum
           borinquense DSM 11551]
          Length = 536

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 49/143 (34%), Positives = 58/143 (40%)
 Frame = +3

Query: 435 DHNPGFSPFHTTQKLHGHLHSSLAPSDHSGLAQHHNDHDRLEAPNDHSHVQTPALCPCPS 614
           DH+ G    H     H H H      DHS  A H +DH    A + H H          S
Sbjct: 89  DHSHGHEHHHHA---HDHSHGEGHTHDHSHGAGHTHDHSH-GAGHTHDH----------S 134

Query: 615 HYAGFVCALIQHDHSLNPCHGNGHLQPRNHLAHDPCPYHGGDLDGHDHARGLGPVQSHEH 794
           H AG       HDHS    HG GH    +H A     +  G    HDH+ G G    H H
Sbjct: 135 HGAGHT-----HDHS----HGAGHTHDHSHGAGHTHDHSHGAGHTHDHSHGAGHTHDHSH 185

Query: 795 GLDSDHVYDHDHAHGPCPYSCHG 863
           G  ++H +D DHAH   P   HG
Sbjct: 186 GDHTEHPHDDDHAH-ETPAEGHG 207


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