BLASTX nr result

ID: Papaver22_contig00020842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020842
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA32792.1| FUS6 [Arabidopsis thaliana]                            138   3e-30
dbj|BAC42193.1| putative FUSCA protein FUS6 [Arabidopsis thaliana]    138   3e-30
ref|NP_567109.1| COP9 signalosome complex subunit 1 [Arabidopsis...   138   3e-30
ref|XP_002511799.1| cop9 signalosome complex subunit, putative [...   137   7e-30
gb|ADE77099.1| unknown [Picea sitchensis]                             135   3e-29

>gb|AAA32792.1| FUS6 [Arabidopsis thaliana]
          Length = 441

 Score =  138 bits (347), Expect = 3e-30
 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 21/199 (10%)
 Frame = +2

Query: 5   PELGNQYTEVIASQDVATYGGLCALASFNKTELQNKMINNIIFGNFLEEVPELKEVLNNF 184
           PELGN Y EVIA QD+ATYGGLCALASF+++EL+ K+I+NI F NFLE VP+++E++N+F
Sbjct: 243 PELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDF 302

Query: 185 YSRRCDSFLEHLENIKAKALLDIHLHEHVETLFTGIR-----------------RMEDAE 313
           YS R  S LE+L ++K+  LLDIHLH+HV+TL+  IR                 RM DA 
Sbjct: 303 YSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAF 362

Query: 314 NSS----KQIKDASLQIQECQRRISYYQNALDALHRIQKSSQLKHQLEQTQAELNEAEAM 481
            +S    ++  +A +   + Q RI  +   L A H  Q+++  +  L+       +  AM
Sbjct: 363 KTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAM 422

Query: 482 LADSRFSKKKGKGCSRREL 538
           L  +   K +    S R+L
Sbjct: 423 LLRANLLKHEYHARSARKL 441


>dbj|BAC42193.1| putative FUSCA protein FUS6 [Arabidopsis thaliana]
          Length = 441

 Score =  138 bits (347), Expect = 3e-30
 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 21/199 (10%)
 Frame = +2

Query: 5   PELGNQYTEVIASQDVATYGGLCALASFNKTELQNKMINNIIFGNFLEEVPELKEVLNNF 184
           PELGN Y EVIA QD+ATYGGLCALASF+++EL+ K+I+NI F NFLE VP+++E++N+F
Sbjct: 243 PELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDF 302

Query: 185 YSRRCDSFLEHLENIKAKALLDIHLHEHVETLFTGIR-----------------RMEDAE 313
           YS R  S LE+L ++K+  LLDIHLH+HV+TL+  IR                 RM DA 
Sbjct: 303 YSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAF 362

Query: 314 NSS----KQIKDASLQIQECQRRISYYQNALDALHRIQKSSQLKHQLEQTQAELNEAEAM 481
            +S    ++  +A +   + Q RI  +   L A H  Q+++  +  L+       +  AM
Sbjct: 363 KTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAM 422

Query: 482 LADSRFSKKKGKGCSRREL 538
           L  +   K +    S R+L
Sbjct: 423 LLRANLLKHEYHARSARKL 441


>ref|NP_567109.1| COP9 signalosome complex subunit 1 [Arabidopsis thaliana]
           gi|20981686|sp|P45432.2|CSN1_ARATH RecName: Full=COP9
           signalosome complex subunit 1; Short=CSN complex subunit
           1; AltName: Full=Constitutive photomorphogenesis protein
           11; AltName: Full=Protein FUSCA 6
           gi|13430766|gb|AAK26005.1|AF360295_1 putative FUSCA
           protein FUS6 [Arabidopsis thaliana]
           gi|18056653|gb|AAL58100.1|AF395057_1 CSN complex subunit
           1 [Arabidopsis thaliana] gi|15293245|gb|AAK93733.1|
           putative FUSCA protein FUS6 [Arabidopsis thaliana]
           gi|332646639|gb|AEE80160.1| COP9 signalosome complex
           subunit 1 [Arabidopsis thaliana]
          Length = 441

 Score =  138 bits (347), Expect = 3e-30
 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 21/199 (10%)
 Frame = +2

Query: 5   PELGNQYTEVIASQDVATYGGLCALASFNKTELQNKMINNIIFGNFLEEVPELKEVLNNF 184
           PELGN Y EVIA QD+ATYGGLCALASF+++EL+ K+I+NI F NFLE VP+++E++N+F
Sbjct: 243 PELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDF 302

Query: 185 YSRRCDSFLEHLENIKAKALLDIHLHEHVETLFTGIR-----------------RMEDAE 313
           YS R  S LE+L ++K+  LLDIHLH+HV+TL+  IR                 RM DA 
Sbjct: 303 YSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAF 362

Query: 314 NSS----KQIKDASLQIQECQRRISYYQNALDALHRIQKSSQLKHQLEQTQAELNEAEAM 481
            +S    ++  +A +   + Q RI  +   L A H  Q+++  +  L+       +  AM
Sbjct: 363 KTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAM 422

Query: 482 LADSRFSKKKGKGCSRREL 538
           L  +   K +    S R+L
Sbjct: 423 LLRANLLKHEYHARSARKL 441


>ref|XP_002511799.1| cop9 signalosome complex subunit, putative [Ricinus communis]
           gi|223548979|gb|EEF50468.1| cop9 signalosome complex
           subunit, putative [Ricinus communis]
          Length = 433

 Score =  137 bits (344), Expect = 7e-30
 Identities = 81/188 (43%), Positives = 112/188 (59%), Gaps = 21/188 (11%)
 Frame = +2

Query: 5   PELGNQYTEVIASQDVATYGGLCALASFNKTELQNKMINNIIFGNFLEEVPELKEVLNNF 184
           PELGN YTEVIA QDVATYGGLCALASF +TEL+NK+I+N+ F NFLE VPE++E++++F
Sbjct: 235 PELGNSYTEVIAPQDVATYGGLCALASFERTELKNKVIDNLNFRNFLELVPEVRELIHDF 294

Query: 185 YSRRCDSFLEHLENIKAKALLDIHLHEHVETLFTGIRR-----------------MEDAE 313
           YS    S L++L N+KA  LLDIHLH+HVETL+  IR                  M +A 
Sbjct: 295 YSSHYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAF 354

Query: 314 NSS----KQIKDASLQIQECQRRISYYQNALDALHRIQKSSQLKHQLEQTQAELNEAEAM 481
            +S    ++  +A +   + Q RI  +   L A H  Q+++  +  L+       +  AM
Sbjct: 355 KTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAM 414

Query: 482 LADSRFSK 505
           L  +   K
Sbjct: 415 LLRANLIK 422


>gb|ADE77099.1| unknown [Picea sitchensis]
          Length = 433

 Score =  135 bits (339), Expect = 3e-29
 Identities = 79/182 (43%), Positives = 114/182 (62%), Gaps = 23/182 (12%)
 Frame = +2

Query: 8   ELGNQYTEVIASQDVATYGGLCALASFNKTELQNKMINNIIFGNFLEEVPELKEVLNNFY 187
           +LGN YT+VIA QDVATYGGLCALASF+++EL+NK+I+NI F NFLE VPE++E++++FY
Sbjct: 236 DLGNNYTDVIAPQDVATYGGLCALASFDRSELKNKVIDNINFRNFLELVPEVRELIHDFY 295

Query: 188 SRRCDSFLEHLENIKAKALLDIHLHEHVETLFTGIRR----------------------M 301
           + R  S +E+L+N+KA  LLDIHLH+HVETL+  IR                       M
Sbjct: 296 ASRYASCIEYLQNLKANLLLDIHLHDHVETLYDQIRHKALIQYTTPFISVDLHTMANAFM 355

Query: 302 EDAENSSKQIKDASLQIQECQRRISYYQNALDALHRIQKSSQLKHQLEQTQAELN-EAEA 478
            +     K++ +A +   + Q RI  +   L A H  Q+++  +  L QT  E + +A A
Sbjct: 356 TNVAGLEKEL-EALIMDNQIQARIDSHNKILYARHADQRNTTFQRVL-QTGVEFDRDARA 413

Query: 479 ML 484
           M+
Sbjct: 414 MM 415


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