BLASTX nr result
ID: Papaver22_contig00020789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00020789
(3494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2066 0.0
gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orient... 2021 0.0
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 2015 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2008 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2008 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 2066 bits (5353), Expect = 0.0
Identities = 1013/1091 (92%), Positives = 1054/1091 (96%)
Frame = +2
Query: 221 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 400
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 401 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 580
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 581 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 760
FKQ+Q+I+NPK+RL+K+LDACKNK+KC+GGDEI+ Q D ++PVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 761 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 940
EGMKMIAEYKIQRKK DDPEQLPEPVERKQQL+AERVL+VLKRISDEDCILLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 941 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIL 1120
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1121 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1300
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1301 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1480
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1481 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1660
EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1661 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1840
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1841 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 2020
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2021 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2200
LLRTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2201 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2380
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TMEKIN+TISKAKNEVK+LIR AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2381 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2560
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2561 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2740
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2741 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2920
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2921 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 3100
LDSLKMKK EFD+V+++E DD+NW P+YM ++VEDLK IREFR+VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3101 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3280
LGTEI TTGDNSWPMPVNL+RLIWNAQKTFKVD RRPSDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3281 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3460
GDD +SMEAQKNATLFFNILLRSTFASKRVLKE+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3461 EMIGCVAAQSI 3493
EMIGCVAAQSI
Sbjct: 1081 EMIGCVAAQSI 1091
>gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orientale]
Length = 1010
Score = 2021 bits (5236), Expect = 0.0
Identities = 1001/1010 (99%), Positives = 1001/1010 (99%)
Frame = +2
Query: 464 HLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHKFKQSQRIKNPKHRLRKVLDAC 643
HLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHKFKQSQRIKNPKHRLRKVLDAC
Sbjct: 1 HLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHKFKQSQRIKNPKHRLRKVLDAC 60
Query: 644 KNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQ 823
KNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQ
Sbjct: 61 KNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQ 120
Query: 824 LPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYARPDWMILQVLXXXXXXXXXSVM 1003
LPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYARPDWMILQVL SVM
Sbjct: 121 LPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVM 180
Query: 1004 MDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIILEFAQLLQFHIATYFDNELPGQ 1183
MDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIILEFAQLLQFHIATYFDNELPGQ
Sbjct: 181 MDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIILEFAQLLQFHIATYFDNELPGQ 240
Query: 1184 PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIA 1363
PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIA
Sbjct: 241 PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIA 300
Query: 1364 LNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIREDGQRLDLRYLKKSSDHHLEL 1543
LNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIREDGQRLDLRYLKKSSDHHLEL
Sbjct: 301 LNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIREDGQRLDLRYLKKSSDHHLEL 360
Query: 1544 GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMN 1723
GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMN
Sbjct: 361 GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMN 420
Query: 1724 MHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN 1903
MHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN
Sbjct: 421 MHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMN 480
Query: 1904 ILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDT 2083
ILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDT
Sbjct: 481 ILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDT 540
Query: 2084 QVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFS 2263
QVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFS
Sbjct: 541 QVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFS 600
Query: 2264 IGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLN 2443
IGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLN
Sbjct: 601 IGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLN 660
Query: 2444 KARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRT 2623
KARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRT
Sbjct: 661 KARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRT 720
Query: 2624 LPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK 2803
LPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK
Sbjct: 721 LPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVK 780
Query: 2804 AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDD 2983
AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDD
Sbjct: 781 AMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDD 840
Query: 2984 DNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQLGTEITTTGDNSWPMPVNLRR 3163
DNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQLGTEITTTGDNSWPMPVNLRR
Sbjct: 841 DNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQLGTEITTTGDNSWPMPVNLRR 900
Query: 3164 LIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVPGDDSMSMEAQKNATLFFNILL 3343
LIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVPGDDSMSMEAQKNATLFFNILL
Sbjct: 901 LIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVPGDDSMSMEAQKNATLFFNILL 960
Query: 3344 RSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPGEMIGCVAAQSI 3493
RSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPGEMIGCVAAQSI
Sbjct: 961 RSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPGEMIGCVAAQSI 1010
>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
polymerase II largest subunit, putative [Ricinus
communis]
Length = 1855
Score = 2015 bits (5221), Expect = 0.0
Identities = 983/1091 (90%), Positives = 1035/1091 (94%)
Frame = +2
Query: 221 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 400
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIE SETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60
Query: 401 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 580
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+K VLSIMRCVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 581 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 760
FKQ+ +IKNPK+RL+K+LDACKNKTKC+GGD+IDV +D ++PVKKSRGGCGAQQP++TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180
Query: 761 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 940
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISD+DC LLG NPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240
Query: 941 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIL 1120
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+KQE+ GAPAHII
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300
Query: 1121 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1300
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1301 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1480
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1481 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1660
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1661 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1840
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1841 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 2020
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2021 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2200
L+RT+AWHS++E G ITPGDT VRIE+GELL+GT+CKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2201 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2380
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TMEKIN+TIS AKN VK+LIR AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720
Query: 2381 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2560
EP+PGRTMMESFEN VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2561 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2740
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2741 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2920
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2921 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 3100
LDSLKMKK EFD+V+++E DD+NW P YM D+++DLKNIRE R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960
Query: 3101 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3280
LGTEI TTGD+SWP+PVNLRRLIWNAQKTFKVD RRPSD+HPME VEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020
Query: 3281 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3460
GDD +S+EAQKNATLFF ILLRST ASKRVL+++ LTREAFDWVIGE+ESRFLQSLVAPG
Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3461 EMIGCVAAQSI 3493
EMIGCVAAQSI
Sbjct: 1081 EMIGCVAAQSI 1091
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 2008 bits (5203), Expect = 0.0
Identities = 986/1091 (90%), Positives = 1038/1091 (95%)
Frame = +2
Query: 221 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 400
MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 401 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 580
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VL+IMR VCFNCSKIL DEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 581 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 760
FKQ+ RIKNPK+RLRK+LDACKNKTKC+GGDEIDVQ +D ++PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 761 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 940
EGMKM AEYK QRKK DDPEQLPEPVERKQ LTAERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 941 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIL 1120
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHII
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1121 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1300
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1301 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1480
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1481 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1660
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1661 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1840
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1841 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 2020
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2021 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2200
L RTSAWHSE+ETG ITPGDT VRIE+GELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2201 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2380
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TIS AKNEVK+LI+ AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2381 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2560
EPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2561 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2740
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2741 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2920
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2921 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 3100
LDSLKMKK EF++++R+EF+D+NW PNYM ++VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 3101 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3280
LGTEI TTG+NSWPMPVNL+RLI NAQKTFK+D RR SDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3281 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3460
G+D +S+EAQKNATLFFNILLRSTFASKRVL E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3461 EMIGCVAAQSI 3493
EMIGCVAAQSI
Sbjct: 1081 EMIGCVAAQSI 1091
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 2008 bits (5203), Expect = 0.0
Identities = 986/1091 (90%), Positives = 1038/1091 (95%)
Frame = +2
Query: 221 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 400
MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 401 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 580
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VL+IMR VCFNCSKIL DEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 581 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 760
FKQ+ RIKNPK+RLRK+LDACKNKTKC+GGDEIDVQ +D ++PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 761 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 940
EGMKM AEYK QRKK DDPEQLPEPVERKQ LTAERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 941 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIL 1120
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHII
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1121 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1300
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1301 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1480
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1481 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1660
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1661 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1840
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1841 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 2020
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2021 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2200
L RTSAWHSE+ETG ITPGDT VRIE+GELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2201 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2380
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TIS AKNEVK+LI+ AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2381 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2560
EPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2561 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2740
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2741 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2920
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2921 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 3100
LDSLKMKK EF++++R+EF+D+NW PNYM ++VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 3101 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3280
LGTEI TTG+NSWPMPVNL+RLI NAQKTFK+D RR SDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3281 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3460
G+D +S+EAQKNATLFFNILLRSTFASKRVL E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3461 EMIGCVAAQSI 3493
EMIGCVAAQSI
Sbjct: 1081 EMIGCVAAQSI 1091