BLASTX nr result

ID: Papaver22_contig00020750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020750
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-li...    73   2e-11
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...    71   8e-11
emb|CBI24290.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li...    70   1e-10

>ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|222845418|gb|EEE82965.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/121 (42%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
 Frame = -3

Query: 418 DIRKWFMKAHTK---NDATNXXXXXXXXXXXXXXXXAIIPQTEKSTNGGQESSGRKKTSR 248
           DIRKWFMKAH K   N ATN                   P+TE    GGQE SGR+KTS+
Sbjct: 4   DIRKWFMKAHDKGNDNAATNAEKKPPPTE----------PKTETPVCGGQEGSGRRKTSK 53

Query: 247 YFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVK 68
           YFA    K K+++E E   AKRK Q       + +KPPP KK+HK   E++      P K
Sbjct: 54  YFAANKQKQKEDKEIEDLPAKRKAQNDGV---QSVKPPPSKKVHKVDDEEEDDDFSLPKK 110

Query: 67  K 65
           K
Sbjct: 111 K 111


>ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 1112

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -3

Query: 430 FDMGDIRKWFMKAHTK-NDATNXXXXXXXXXXXXXXXXAIIPQTEKSTNGGQESSGRKKT 254
           F   DIRKWFMK H K N+A +                   PQ+EK+  GGQESSGR+ T
Sbjct: 160 FVASDIRKWFMKTHDKGNNAASSKPSNQPKPSSDK------PQSEKTVAGGQESSGRRIT 213

Query: 253 SRYFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTP 74
           S+YF +   K KD++E ++  AKRK  + S+ +      P  KK+H  + + D    PT 
Sbjct: 214 SKYFNSNKQKGKDKKEMQELPAKRKNMKDSEEI------PEPKKIH--EDDGDDSVLPTN 265

Query: 73  VKKL 62
            KKL
Sbjct: 266 KKKL 269


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
 Frame = -3

Query: 418 DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXA--IIPQTEKSTNGGQESSGRKKTSRY 245
           DIRKWFMK H  ND  N                      Q EK  +GGQESS R+KTS+Y
Sbjct: 7   DIRKWFMKKHD-NDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 244 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD 95
           F     K KDE+E E+  AKRK Q+ +K   E L PPP KK+ +   + D
Sbjct: 66  F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRRVVDDDD 108


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
 Frame = -3

Query: 418 DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXA--IIPQTEKSTNGGQESSGRKKTSRY 245
           DIRKWFMK H  ND  N                      Q EK  +GGQESS R+KTS+Y
Sbjct: 7   DIRKWFMKKHD-NDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 244 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD 95
           F     K KDE+E E+  AKRK Q+ +K   E L PPP KK+ +   + D
Sbjct: 66  F----QKPKDEKEMEELPAKRKTQKGTK---ESLNPPPSKKIRRVVDDDD 108


>ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 947

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
 Frame = -3

Query: 424 MGDIRKWFMKAHTK-NDATNXXXXXXXXXXXXXXXXAIIPQTEKSTN----GGQESSGRK 260
           M DIRKWFMK H K N+A +                   PQ+EK+      GGQESSGR+
Sbjct: 1   MSDIRKWFMKTHDKGNNAASSKPSSDK------------PQSEKTVAFAVAGGQESSGRR 48

Query: 259 KTSRYFATKADKSKDEQEAEKTVAKRKPQESSKALDED-----LKPPPVKKL---HKAKK 104
            TS+YF +   K KDE+E ++  AKRK  + S+ + ED     + P   KKL      KK
Sbjct: 49  ITSKYFNSNKQKGKDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKK 108

Query: 103 EKDGGSKPTPVK 68
            K G  +  P K
Sbjct: 109 LKSGSGRGIPKK 120


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