BLASTX nr result

ID: Papaver22_contig00020678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020678
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    57   3e-06
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    57   3e-06

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = -2

Query: 606 LGVLKGYLCLLYSSHVNDHFEVWEMLDYGVHESWTRRYIITHESIIRDHTYLNPLWSFGI 427
           LGVL+G LC+ Y  +   HF VW M DYGV ESW +   I +     D +Y  P +    
Sbjct: 300 LGVLQGCLCMNYD-YKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISEN 358

Query: 426 VKILFLTCGILVLYDTEHGSAR--ELSTDIDYFKDGVNYYESLVS 298
            K+L +    L+LYD  + S +  ++ +   +F D   Y E+LVS
Sbjct: 359 GKVLLMFEFDLILYDPRNNSFKYPKIESGKGWF-DAEVYVETLVS 402


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
 Frame = -2

Query: 672 ESFKEMQLPKELSVKNKDLDIGLGVLKGYLCLLYSSHVNDHFEVWEMLDYGVHESWTRRY 493
           E ++E+  P+    K+K+  I LGVL+G LC L ++ + +  +VW M +YGV ESWT+ +
Sbjct: 238 EDYREVLQPE---YKDKNFYIDLGVLRGCLCFL-ANFLGERVDVWMMKEYGVKESWTKLF 293

Query: 492 IITHESIIRDHTYLNPL-WSFGIVKILFLTCGI-LVLYDTEHGSARELSTDIDYFKDGVN 319
            +    +I     L PL +S    ++L     + L  YD +    +     I Y  +   
Sbjct: 294 SVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKNRIPGIPYSFEADT 353

Query: 318 YYESLVSLKSGTYVGREGRIEE 253
           + ESL+S+    ++  +GR ++
Sbjct: 354 FVESLISVSPNRHL--DGRTQD 373


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