BLASTX nr result

ID: Papaver22_contig00020653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020653
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...    92   8e-17
emb|CBI29799.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu...    79   7e-13
ref|XP_002308925.1| chromatin remodeling complex subunit [Populu...    78   2e-12
ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase...    76   6e-12

>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
 Frame = +1

Query: 1    VAPEDVVSILFDEA--EQRIRGLPLQ----GKDRQKKKPGTKGIRIDAEGVATFDDLTNI 162
            +APEDVVS+L D+A  EQ++R LPLQ     KD+QKKK GTKGI +DAEG AT +D  NI
Sbjct: 1371 LAPEDVVSLLLDDAQLEQKLRDLPLQVRFKSKDKQKKKRGTKGILLDAEGDATLEDFPNI 1430

Query: 163  T-SNAAAADPVPVHDXXXXXXXXXXXXXXDNPKRRGSKKPLPNADSVMGMNEHNTMD--- 330
            +  N     P                     PK R S+K + N DS  GM + N+M    
Sbjct: 1431 SQGNGQEPSPDAERPKSSSKKRKAATDKQTPPKPRNSQKAMKNVDSYTGMTDPNSMAMDY 1490

Query: 331  GFHDSPGTTIPQLXXXXXXXXXXXSVNDDLEPVLSAPNPVGQNPDSNPFMHDYSPDDFRA 510
               DS      QL           SVN++LEP  +    + +     P + +  P   RA
Sbjct: 1491 ELDDSLQNDDMQLQKHKRPKRPTKSVNENLEPAFTNSTVIIEQTQYQPHL-ELGPGGLRA 1549

Query: 511  EAEETSPMN 537
              ++ +P++
Sbjct: 1550 GGKDDTPLH 1558


>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 65/185 (35%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
 Frame = +1

Query: 1    VAPEDVVSILFDEA--EQRIRGLPLQGKDRQKKKPGTKGIRIDAEGVATFDDLTNIT-SN 171
            +APEDVVS+L D+A  EQ++R LPLQ  D+QKKK GTKGI +DAEG AT +D  NI+  N
Sbjct: 1371 LAPEDVVSLLLDDAQLEQKLRDLPLQ--DKQKKKRGTKGILLDAEGDATLEDFPNISQGN 1428

Query: 172  AAAADPVPVHDXXXXXXXXXXXXXXDNPKRRGSKKPLPNADSVMGMNEHNTMD---GFHD 342
                 P                     PK R S+K + N DS  GM + N+M       D
Sbjct: 1429 GQEPSPDAERPKSSSKKRKAATDKQTPPKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDD 1488

Query: 343  SPGTTIPQLXXXXXXXXXXXSVNDDLEPVLSAPNPVGQNPDSNPFMHDYSPDDFRAEAEE 522
            S      QL           SVN++LEP  +    + +     P + +  P   RA  ++
Sbjct: 1489 SLQNDDMQLQKHKRPKRPTKSVNENLEPAFTNSTVIIEQTQYQPHL-ELGPGGLRAGGKD 1547

Query: 523  TSPMN 537
             +P++
Sbjct: 1548 DTPLH 1552


>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222867901|gb|EEF05032.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1540

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 64/177 (36%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
 Frame = +1

Query: 1    VAPEDVVSILFDEA--EQRIRGLPLQGKDRQKKKPGTKGIRIDAEGVATFDDLTNI---- 162
            +APEDVVS+L D+A  EQ++R +PLQ +DRQKKKP TK IR+DAEG ATF+DLT      
Sbjct: 1375 LAPEDVVSLLLDDAQLEQKLREIPLQARDRQKKKP-TKAIRVDAEGDATFEDLTETVAQG 1433

Query: 163  TSNAAAADPVPVHDXXXXXXXXXXXXXXDNPKRRGSKKPLPNADSVMGMNEHNT--MDGF 336
            T N  + D   +                 N ++  S K + +       NE N+  MD  
Sbjct: 1434 TGNEQSEDAEKLKS------------PNSNKRKAASDKQITSKPRNSQKNEPNSSPMDYE 1481

Query: 337  HDSP-GTTIPQLXXXXXXXXXXXSVNDDLEPVLSAPNPVG----QNPDSNPFMHDYS 492
             D P   + PQ            SVN+ LEP  +A   +     Q P +N     YS
Sbjct: 1482 LDDPFPNSEPQSQRPKRLKRPKKSVNEKLEPAFTATPSIDSSQIQYPPTNNLASTYS 1538


>ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854901|gb|EEE92448.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1483

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
 Frame = +1

Query: 1    VAPEDVVSILFDEA--EQRIRGLPLQGKDRQKKKPGTKGIRIDAEGVATFDDLTNITSNA 174
            +APEDVVS+L D+A  EQ++R +PLQ KDRQKKKP TK IR+DAEG AT +DLT   +  
Sbjct: 1319 LAPEDVVSLLLDDAQLEQKLREIPLQAKDRQKKKP-TKAIRVDAEGDATLEDLTETVTQG 1377

Query: 175  AAADPVPVHDXXXXXXXXXXXXXXD--NPKRRGSKKPLPNADSVMGMNEHNTMDGF-HDS 345
               +P    +                  PK R S+K   N+ S+    ++   D F +D 
Sbjct: 1378 TGNEPSEDTEKLKPNNKKRKAASDKQITPKPRNSQKNELNSTSM----DYELDDPFLNDE 1433

Query: 346  PGTTIPQLXXXXXXXXXXXSVNDDLEPVLSAPNPVG----QNPDSNPFMHDYS 492
            P +  P+            SVN+ LEP  +A   V     Q P +N     YS
Sbjct: 1434 PQSQRPK-----RLKRPKKSVNEKLEPAFTATPQVDSSQMQYPHANNLPSTYS 1481


>ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis
           sativus]
          Length = 711

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
 Frame = +1

Query: 1   VAPEDVVSILFDEA--EQRIRGLPLQGKDRQKKKPGTKGIRIDAEGVATFDDLTNITSNA 174
           +APEDVVS+L D+A  EQ++R +P+  KDRQKKK   KGIR+DAEG A+ +DLTN  S  
Sbjct: 564 LAPEDVVSLLLDDAQLEQKLREIPIVAKDRQKKKQA-KGIRVDAEGDASLEDLTNPESRV 622

Query: 175 AAADPVPVHDXXXXXXXXXXXXXXDNPKRRG--SKKPLPNADSVMGMNEHNTMDGF--HD 342
              DP P                 ++ KR+G   K+    A S+  +NE + +  F   +
Sbjct: 623 TEYDPSP----------DPEKTKANSKKRKGGPEKQNSSKARSLQRINEMSPVVDFDLDE 672

Query: 343 SPGTTIPQLXXXXXXXXXXXSVNDDLEPVLSAPN 444
           S     PQ            SVN++L P  ++ N
Sbjct: 673 SRQNLEPQTQKPKRPKRPTKSVNENLVPTTTSTN 706


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