BLASTX nr result

ID: Papaver22_contig00020535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020535
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   102   2e-20
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...   102   2e-20
emb|CBI23407.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN82758.1| hypothetical protein VITISV_013349 [Vitis vinifera]    97   1e-18
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    92   3e-17

>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  102 bits (255), Expect = 2e-20
 Identities = 61/137 (44%), Positives = 73/137 (53%)
 Frame = +1

Query: 16   SMIADPLDFRE*VSMLFNECYRICEATGTNDAAVTHFMSQLQHSGLLKGDDMIDRLFRLL 195
            S+  DP  FRE VSMLF E YRICE  G ND A THF+ QL  SGLLKGDDM DR FRLL
Sbjct: 1869 SVEPDPAGFREQVSMLFAEWYRICELPGANDTASTHFIVQLHQSGLLKGDDMPDRFFRLL 1928

Query: 196  TVIILT*CGIQKKKKRVKMPQAAGCCEQNLVLFFKFQELSVSHCMYTEGVVPASLTL*SP 375
                                                 E++V+HC+ TEG+   +L   SP
Sbjct: 1929 ------------------------------------MEIAVAHCLSTEGINSGALQ--SP 1950

Query: 376  QQEPVLSFIVVDMYAKL 426
            QQ P +SF+ +D+YAKL
Sbjct: 1951 QQMPTMSFLAIDIYAKL 1967


>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score =  102 bits (255), Expect = 2e-20
 Identities = 61/137 (44%), Positives = 73/137 (53%)
 Frame = +1

Query: 16   SMIADPLDFRE*VSMLFNECYRICEATGTNDAAVTHFMSQLQHSGLLKGDDMIDRLFRLL 195
            S+  DP  FRE VSMLF E YRICE  G ND A THF+ QL  SGLLKGDDM DR FRLL
Sbjct: 1869 SVEPDPAGFREQVSMLFAEWYRICELPGANDTASTHFIVQLHQSGLLKGDDMPDRFFRLL 1928

Query: 196  TVIILT*CGIQKKKKRVKMPQAAGCCEQNLVLFFKFQELSVSHCMYTEGVVPASLTL*SP 375
                                                 E++V+HC+ TEG+   +L   SP
Sbjct: 1929 ------------------------------------MEIAVAHCLSTEGINSGALQ--SP 1950

Query: 376  QQEPVLSFIVVDMYAKL 426
            QQ P +SF+ +D+YAKL
Sbjct: 1951 QQMPTMSFLAIDIYAKL 1967


>emb|CBI23407.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/137 (41%), Positives = 75/137 (54%)
 Frame = +1

Query: 16  SMIADPLDFRE*VSMLFNECYRICEATGTNDAAVTHFMSQLQHSGLLKGDDMIDRLFRLL 195
           S+  DP+ FR+ VS+LF + Y+I E  GTND A+THF+SQLQ SG L GDD  DR FRLL
Sbjct: 410 SVGVDPVGFRDQVSVLFADWYQIYELHGTNDPAITHFISQLQQSGFLNGDDTSDRFFRLL 469

Query: 196 TVIILT*CGIQKKKKRVKMPQAAGCCEQNLVLFFKFQELSVSHCMYTEGVVPASLTL*SP 375
           T                                    EL+V+HC+ +EG+   SL+L SP
Sbjct: 470 T------------------------------------ELAVAHCLSSEGINSGSLSLHSP 493

Query: 376 QQEPVLSFIVVDMYAKL 426
           Q    +SF+ +D+YAKL
Sbjct: 494 QTGQNMSFLAIDVYAKL 510


>emb|CAN82758.1| hypothetical protein VITISV_013349 [Vitis vinifera]
          Length = 941

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/137 (41%), Positives = 75/137 (54%)
 Frame = +1

Query: 16  SMIADPLDFRE*VSMLFNECYRICEATGTNDAAVTHFMSQLQHSGLLKGDDMIDRLFRLL 195
           S+  DP+ FR+ VS+LF + Y+I E  GTND A+THF+SQLQ SG L GDD  DR FRLL
Sbjct: 410 SVGVDPVGFRDQVSVLFADWYQIYELHGTNDPAITHFISQLQQSGFLNGDDTSDRFFRLL 469

Query: 196 TVIILT*CGIQKKKKRVKMPQAAGCCEQNLVLFFKFQELSVSHCMYTEGVVPASLTL*SP 375
           T                                    EL+V+HC+ +EG+   SL+L SP
Sbjct: 470 T------------------------------------ELAVAHCLSSEGINSGSLSLHSP 493

Query: 376 QQEPVLSFIVVDMYAKL 426
           Q    +SF+ +D+YAKL
Sbjct: 494 QTGQNMSFLAIDVYAKL 510


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
 Frame = +1

Query: 4    RDEGSMIA--DPLDFRE*VSMLFNECYRICEATGTNDAAVTHFMSQLQHSGLLKGDDMID 177
            R++ S++   DP  FR+ VS+LF E YRICE  G N+AA  HF+ QL  +GLLKGDDM D
Sbjct: 1879 REDSSILESEDPAGFRDQVSILFAEWYRICELPGANEAAFNHFILQLHQNGLLKGDDMTD 1938

Query: 178  RLFRLLTVIILT*CGIQKKKKRVKMPQAAGCCEQNLVLFFKFQELSVSHCMYTEGVVPAS 357
            R FRLLT                                    E+SV+HC+ +E V+ + 
Sbjct: 1939 RFFRLLT------------------------------------EISVAHCLSSE-VINSG 1961

Query: 358  LTL*SPQQEPVLSFIVVDMYAKL 426
                SPQQ   LSF+ +D+YAKL
Sbjct: 1962 ALQSSPQQIQNLSFLAIDIYAKL 1984


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