BLASTX nr result

ID: Papaver22_contig00019985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019985
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    57   6e-06

>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 82/330 (24%), Positives = 124/330 (37%), Gaps = 24/330 (7%)
 Frame = +2

Query: 2   KLWYNTILNDKRFATIHLSQNQNKLSLFFNLHNLTLKKKPHGENTYFFSLERSKKDHAFD 181
           + W   I +D  FA +HL +     ++  +LH L L   P      F S++      A D
Sbjct: 33  RTWQYLISSDPEFAKLHLERVLQVTNV--HLHRLLLSADP------FQSVDMEAYCDADD 84

Query: 182 FKCRNIATFRVKN------EPVGNCNGLTCVKIAKEHVGTYGAVNVTNPISSETLGIIYR 343
                   F V+N      E VG+CNGL       +H      + V NP + E+  +   
Sbjct: 85  NFLIREHRFPVRNPEDDDFEFVGSCNGLISAVFGSDH-----EITVWNPSTGESRKL--- 136

Query: 344 NPTDEGSGYNPLCHGFGFDSLSQEYKVVLVFTSRTNDGFLCMVFTLGTNSWRKCLISTAE 523
            P    S  + L +GFG+DS   +YK+V   +S + +     VF L  N W         
Sbjct: 137 -PAPTSSTEDKLFYGFGYDSKLDDYKIVRGASSASCNEVQMEVFNLKGNRW--------- 186

Query: 524 LXXXXXXXXXXXRMVTRVSRNFCPSASATLCGGDLFWRVTNQVLEEEDGNNNNNKTEMLL 703
                       R +  +  N     SA    G L W V           +  N+  M++
Sbjct: 187 ------------RAIQNLHCNVRFQGSAIALNGILHWLV-----------DQLNEGLMIV 223

Query: 704 SFDLHKEK-IQLIRLPAEST-----------------LASQTTNEHQYLIAHHHQLVEFK 829
           S DL +EK ++++ LP   T                  +S TTN   + +         K
Sbjct: 224 SLDLAEEKFLEMVVLPDYVTENWGTELKVLGDSLSVCSSSHTTNFEAWTV---------K 274

Query: 830 GYPCIARFEKIIMNSNSDRSSCCKMHLYIL 919
           GY   A + K + + NSD    CK  L +L
Sbjct: 275 GYGSKASWLK-LFSFNSDPLPGCKYWLNVL 303


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