BLASTX nr result

ID: Papaver22_contig00019832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019832
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524560.1| RNA binding protein, putative [Ricinus commu...    60   6e-07
ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249...    58   2e-06

>ref|XP_002524560.1| RNA binding protein, putative [Ricinus communis]
            gi|223536113|gb|EEF37768.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 929

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
 Frame = -1

Query: 715  LSSSSNYSYPERALNQVSSIP--SLQPEQLAQLAS-LLGQRQHTNSGSALSLQDDRKISG 545
            LS +   S  E   +  SS+P   LQP+QLAQLAS LLGQ++   S   +S+ +D + + 
Sbjct: 767  LSGNRQSSLQENKPSIPSSLPIAGLQPQQLAQLASSLLGQQRQPGSNPNVSMGEDIRQTN 826

Query: 544  IINQQGVSFESSEKSTSQNQGSASGTLASQFTQDHQ-RPQMSNAATVSQTNLTEPQREAP 368
             +N       +++    QN    S    SQF Q  + + Q   A+ V +   T  QRE  
Sbjct: 827  TMNPPENQVRTAQAHGFQNSRMVSDISKSQFGQPLKFQQQQHQASNVPKPVPTAVQREV- 885

Query: 367  EWQGNPSSQSNIGAEEESESNPQKR 293
              Q   S   N  A+EE++ +PQKR
Sbjct: 886  --QSVSSQMQNTSAQEEADGDPQKR 908


>ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249524 [Vitis vinifera]
          Length = 953

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
 Frame = -1

Query: 706  SSNYSYPERALNQVSSIP---SLQPEQLAQLASLLGQRQHTNSGSALSLQDDRKISGIIN 536
            S +   P + +    S+P   SLQPEQLAQLAS L  +Q  +  S LS  +D +    +N
Sbjct: 795  SGSSKLPLQEIKPSVSLPMPVSLQPEQLAQLASSLLGQQRQSGSSMLSGGEDFRQPNTMN 854

Query: 535  QQGVSFESSEKSTSQNQGSASGTLASQFTQ-DHQRPQMSNAATVSQTNLTEPQREAPEWQ 359
                 F +++K   QN   ++    SQF Q   Q+ Q  N   +  T+  E Q      Q
Sbjct: 855  PPENPFRTAQKYALQNHQVSTELSTSQFGQVQQQQQQTPNVPVMPHTSHREVQTGV---Q 911

Query: 358  GNPSSQSNIGAEEESESNPQKR 293
            GN   QS    +EE E++PQKR
Sbjct: 912  GNQPLQST-ETQEEVEADPQKR 932


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