BLASTX nr result

ID: Papaver22_contig00019530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019530
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [...    80   1e-13
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...    76   3e-12
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...    74   9e-12
ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago t...    73   2e-11
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...    73   2e-11

>ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223527094|gb|EEF29275.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 78

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/56 (67%), Positives = 48/56 (85%)
 Frame = +2

Query: 26  RLFPQSVKVICDHRSGKSKGYGFVQFMSEKSASTALEELNGQLLDGKNIRVFYANK 193
           R F  +VKVICDH +GKS+GYGFV+F SE +AS AL+E+NGQLLDG+NIRV YA++
Sbjct: 22  RNFVLAVKVICDHVNGKSEGYGFVKFTSESAASKALKEMNGQLLDGRNIRVCYAHR 77


>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = +2

Query: 44  VKVICDHRSGKSKGYGFVQFMSEKSASTALEELNGQLLDGKNIRVFYANK 193
           VKVICDH SGKSKGYGFVQF S+  A  AL+E++GQ LDG+NIRV YA+K
Sbjct: 58  VKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHK 107


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = +2

Query: 44  VKVICDHRSGKSKGYGFVQFMSEKSASTALEELNGQLLDGKNIRVFYANK 193
           VKVICDH +GKS+GYGFV+F+SE +A+ A +E+NGQ+LDG+ IRV YA+K
Sbjct: 87  VKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQILDGRRIRVSYAHK 136


>ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 112

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/50 (66%), Positives = 45/50 (90%)
 Frame = +2

Query: 44  VKVICDHRSGKSKGYGFVQFMSEKSASTALEELNGQLLDGKNIRVFYANK 193
           VKVIC+HR+G+SKGYGFV+F SE +A+TA +EL+GQ++DG+ IRV YA+K
Sbjct: 62  VKVICNHRTGESKGYGFVRFNSETAAATARKELHGQIVDGRRIRVGYAHK 111


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = +2

Query: 44  VKVICDHRSGKSKGYGFVQFMSEKSASTALEELNGQLLDGKNIRVFYA 187
           VKVICDH+SGKSKGYGFV F SE++A++AL  +N QLL+G+NIRV YA
Sbjct: 55  VKVICDHKSGKSKGYGFVLFDSEEAAASALASMNNQLLEGRNIRVEYA 102


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