BLASTX nr result

ID: Papaver22_contig00019445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019445
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              151   3e-36
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   151   3e-36
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-l...   151   6e-35
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l...   150   2e-34

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  151 bits (381), Expect(2) = 3e-36
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = -3

Query: 491 AERKNRDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDV 312
           AERKNRDEFRKLMEEHVAAG LTAKTHWR YCMKVKD   Y+AV+SNTSGSTPKDLFEDV
Sbjct: 678 AERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPKDLFEDV 737

Query: 311 AEELEKQYRDDKTRVKDALKLGKITMS 231
           AEELEKQY +DK R+KDA+KL K+T++
Sbjct: 738 AEELEKQYHEDKARIKDAMKLSKVTIA 764



 Score = 26.2 bits (56), Expect(2) = 3e-36
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 123 VSDINLQLVFXXXXXXXXXXXXXXXXXXXXXADDFSDLLHS 1
           +SD+NL+LVF                     ADDF+DLL S
Sbjct: 785 ISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRS 825


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  151 bits (381), Expect(2) = 3e-36
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = -3

Query: 491 AERKNRDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDV 312
           AERKNRDEFRKLMEEHVAAG LTAKTHWR YCMKVKD   Y+AV+SNTSGSTPKDLFEDV
Sbjct: 668 AERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPKDLFEDV 727

Query: 311 AEELEKQYRDDKTRVKDALKLGKITMS 231
           AEELEKQY +DK R+KDA+KL K+T++
Sbjct: 728 AEELEKQYHEDKARIKDAMKLSKVTIA 754



 Score = 26.2 bits (56), Expect(2) = 3e-36
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 123 VSDINLQLVFXXXXXXXXXXXXXXXXXXXXXADDFSDLLHS 1
           +SD+NL+LVF                     ADDF+DLL S
Sbjct: 775 ISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRS 815


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  152 bits (385), Expect = 3e-35
 Identities = 71/86 (82%), Positives = 79/86 (91%)
 Frame = -3

Query: 491 AERKNRDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDV 312
           AERKNRDEFRKL+EEHVA+G LTAKTHW  YC+KVKDLP Y AV++NTSGS PKDLFEDV
Sbjct: 653 AERKNRDEFRKLLEEHVASGSLTAKTHWLDYCLKVKDLPPYQAVATNTSGSKPKDLFEDV 712

Query: 311 AEELEKQYRDDKTRVKDALKLGKITM 234
           +EELEKQY DDKTR+KDA+KLGKITM
Sbjct: 713 SEELEKQYHDDKTRIKDAMKLGKITM 738


>ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 796

 Score =  151 bits (382), Expect = 6e-35
 Identities = 70/87 (80%), Positives = 81/87 (93%)
 Frame = -3

Query: 491 AERKNRDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDV 312
           AERKNRDEFRK+MEEH+AAG LT K HWR YCMKVK+LPAY+AV++NTSGSTPKDLFEDV
Sbjct: 451 AERKNRDEFRKMMEEHIAAGLLTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKDLFEDV 510

Query: 311 AEELEKQYRDDKTRVKDALKLGKITMS 231
           AEEL+KQYRDDKTR+KDA+KL K+ +S
Sbjct: 511 AEELQKQYRDDKTRIKDAVKLRKVAIS 537


>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 983

 Score =  150 bits (378), Expect = 2e-34
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = -3

Query: 488 ERKNRDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDVA 309
           ERKNRDEFRK+MEEH+AAG LT K HWR YCMKVK+LPAY+AV++NTSGSTPKDLFEDVA
Sbjct: 639 ERKNRDEFRKMMEEHIAAGLLTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKDLFEDVA 698

Query: 308 EELEKQYRDDKTRVKDALKLGKITMS 231
           EEL+KQYRDDKTR+KDA+KL K+ +S
Sbjct: 699 EELQKQYRDDKTRIKDAVKLRKVAIS 724


Top