BLASTX nr result

ID: Papaver22_contig00019103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019103
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37658.1| integrase [Populus trichocarpa]                        127   1e-27
gb|ABG37655.1| integrase [Populus trichocarpa]                        113   2e-23
gb|ABG37652.1| integrase [Populus trichocarpa]                        103   2e-20
gb|ABG37654.1| integrase [Populus trichocarpa]                         97   2e-18
ref|XP_003633628.1| PREDICTED: uncharacterized protein LOC100854...    95   7e-18

>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 9/144 (6%)
 Frame = +3

Query: 3   PTIPAFQEVLHDQANSMDTYKRPFSSPYSETYNPNWRNHPNFSWRNGPTMNGVNVPQGSS 182
           PT+P+F+E LH+QA++++ ++RP  +PYS+TYNP WRNHPNFSW++       + P   +
Sbjct: 106 PTLPSFKECLHEQAHALNNFQRPNHNPYSQTYNPGWRNHPNFSWKSENNNAQTSQPPFQA 165

Query: 183 SSN---------PYVPPHKKTLEDTLQTFMQGQTQINQNAMKTLDELKTSIGRIESRLNV 335
             N         PY PP ++ LE+TL  +M+ Q  IN    +++ ++K ++ ++ S L  
Sbjct: 166 HHNFQNCHGYAPPYAPPPRRNLEETLHVYMEKQEAINTQLAQSMTDVKDTLAKLTSALRF 225

Query: 336 REKGTLPAQTQPNPKGQFEVKNSN 407
           +EKG  P+Q Q NPKGQ+   N+N
Sbjct: 226 QEKGKFPSQPQQNPKGQYNA-NAN 248


>gb|ABG37655.1| integrase [Populus trichocarpa]
          Length = 1263

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
 Frame = +3

Query: 15  AFQEVLHDQANSMDTYKRPFSSPYSETYNPNWRNHPNFSWRNGPTMNGVNVPQGSSSSN- 191
           A +E LH+QA+++++++RP  +PYS+TYNP WRNHPNFSW++       + P   +  N 
Sbjct: 527 ARKECLHEQAHALNSFQRPNHNPYSQTYNPGWRNHPNFSWKSDNNNAQTSQPPFQAHHNF 586

Query: 192 --------PYVPPHKKTLEDTLQTFMQGQTQINQNAMKTLDELKTSIGRIESRLNVREKG 347
                   PY P  ++ LE+TL  F++ Q  IN    +++   K ++ +  S L+ +EKG
Sbjct: 587 QNSHGYAPPYAPSPRRNLEETLHAFIEKQETINTQLAQSMTNFKDALAKFTSALSFQEKG 646

Query: 348 TLPAQTQPNPKGQFEVKNSN 407
             P+Q Q NPKGQ+    S+
Sbjct: 647 KFPSQPQQNPKGQYNANASS 666


>gb|ABG37652.1| integrase [Populus trichocarpa]
          Length = 747

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/139 (33%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
 Frame = +3

Query: 18  FQEVLHDQANSMDTYKRPFSSPYSETYNPNWRNHPNFSWRNGPTMNGVNVPQGSSSSN-- 191
           + + LH+QA+++++++RP  +PYS+TYNP WRNH NF+W++       + P   +  N  
Sbjct: 29  YWKCLHEQAHALNSFQRPNHNPYSQTYNPGWRNHLNFNWKSDNNNAQTSQPPFQAHHNFQ 88

Query: 192 -------PYVPPHKKTLEDTLQTFMQGQTQINQNAMKTLDELKTSIGRIESRLNVREKGT 350
                  PY PP K+ LE+TL   ++ + Q + +  +++   K ++ ++ S L+ +EKG 
Sbjct: 89  NSHGYALPYAPPPKRNLEETLHALIESKRQ-SHSLAQSMTNFKDTLAKLTSSLSFQEKGK 147

Query: 351 LPAQTQPNPKGQFEVKNSN 407
            P+Q Q NPKGQ+    S+
Sbjct: 148 FPSQPQQNPKGQYNANASS 166


>gb|ABG37654.1| integrase [Populus trichocarpa]
          Length = 1136

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/121 (38%), Positives = 75/121 (61%), Gaps = 9/121 (7%)
 Frame = +3

Query: 12   PAFQEVLHDQANSMDTYKRPFSSPYSETYNPNWRNHPNFSWRNG--------PTMNGVNV 167
            PAF E LH+QA+++++++RP  + YS+TYNP WR+HPNFSW++G        P    ++ 
Sbjct: 729  PAFCECLHEQAHALNSFQRPNHNSYSQTYNPGWRDHPNFSWKSGNNNAQTSQPPFQALHN 788

Query: 168  PQGSSSSNP-YVPPHKKTLEDTLQTFMQGQTQINQNAMKTLDELKTSIGRIESRLNVREK 344
             Q S    P YVPP ++ L++TL  F++ Q  IN    +T+ +LK +  +    L+ +EK
Sbjct: 789  FQNSHGYAPLYVPPPRRNLDETLHAFIEKQETINTQNAQTMADLKDTHAKFTFTLSFQEK 848

Query: 345  G 347
            G
Sbjct: 849  G 849



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 22/40 (55%), Positives = 34/40 (85%)
 Frame = +3

Query: 21  QEVLHDQANSMDTYKRPFSSPYSETYNPNWRNHPNFSWRN 140
           +E LH+QA+ +++++RP  +PYS+TYNP W NHPNFSW++
Sbjct: 24  EECLHEQAHGLNSFQRPNHNPYSQTYNPGWSNHPNFSWKS 63


>ref|XP_003633628.1| PREDICTED: uncharacterized protein LOC100854181 [Vitis vinifera]
          Length = 1267

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 29/160 (18%)
 Frame = +3

Query: 3   PTIPAFQEVLHDQANSMDTYKRPFS-SPYSETYNPNWRNHPNFSWRNGPT---------- 149
           PT+PA Q++  +QAN++ TYK+  S SPYS TYNP+WRNHPN SWR G            
Sbjct: 304 PTLPAVQDMFTEQANALGTYKQYSSNSPYSNTYNPSWRNHPNLSWRGGNNGQFQQQGNRF 363

Query: 150 ----MNGVN--VPQGSSSSNPYVPPHK-----KTLEDTLQTFMQ-------GQTQINQNA 275
                NG     PQG  S N +   H+      +LED ++ F+Q        Q +IN   
Sbjct: 364 QGNQTNGQQGFQPQGMPSQN-FQQQHQASLSNSSLEDMMREFIQKQDKRNEDQNRINAQT 422

Query: 276 MKTLDELKTSIGRIESRLNVREKGTLPAQTQPNPKGQFEV 395
            + L +++T++ ++   L+  EKG  PAQ Q NP+G  EV
Sbjct: 423 SQELVDIRTTLSQLAVSLS-HEKGKFPAQPQKNPRGVNEV 461


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