BLASTX nr result

ID: Papaver22_contig00017994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017994
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11098.1| ABC protein [Coptis japonica]                          57   8e-06
ref|XP_002519336.1| multidrug resistance protein 1, 2, putative ...    57   8e-06

>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = -2

Query: 1098 ISSIRTVCSISPQVPIHIVA*IITGENQAIISYDKSLTKVYKSGV*EGIVAVLGFGSTSS 919
            I SIRTV S S             GE  AI  Y+KSL K YKSGV EG+ + LG G++  
Sbjct: 263  IGSIRTVASFS-------------GEKHAITQYEKSLQKAYKSGVHEGLASGLGLGASML 309

Query: 918  VLYCSYAFDIY 886
            + +CSYA  I+
Sbjct: 310  IFFCSYALAIW 320


>ref|XP_002519336.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223541651|gb|EEF43200.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1266

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = -2

Query: 1098 ISSIRTVCSISPQVPIHIVA*IITGENQAIISYDKSLTKVYKSGV*EGIVAVLGFGSTSS 919
            I SIRTV S              TGE  A++ Y+KSL++ Y SGV EG+ A +GFG+   
Sbjct: 257  IGSIRTVASF-------------TGEKHAVVRYNKSLSRAYDSGVQEGLAAGVGFGTLMF 303

Query: 918  VLYCSYAFDIY 886
            +L CSY F ++
Sbjct: 304  ILLCSYGFAVW 314


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