BLASTX nr result

ID: Papaver22_contig00017572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017572
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         290   1e-76
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   289   2e-76
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              289   2e-76
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   280   1e-73

>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  290 bits (742), Expect = 1e-76
 Identities = 141/196 (71%), Positives = 163/196 (83%)
 Frame = -3

Query: 590 RQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWYCKALESEVKGRASQWDQ 411
           R TCL+LEIP       E IFIKG WF   F L ITDG+N+W+C A E EV+GRA+QWDQ
Sbjct: 7   RHTCLKLEIP-------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWDQ 59

Query: 410 PVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKT 231
           PVS YI+ AE+HLGF+ PGS Y F DAG+G+KRLSWTFEK+GT LEWR KC+PSPD KKT
Sbjct: 60  PVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKT 119

Query: 230 TSEILDFLMDANIRLSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVG 51
           T+ ILDFLMDANIRLSEEVVRK QSF+RLK EAEKCLAQSEKF+++K E E+A+YAKF+G
Sbjct: 120 TTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLG 179

Query: 50  VLNSKKAKLRELRDRL 3
           VLNSKK KLRELRD+L
Sbjct: 180 VLNSKKRKLRELRDQL 195


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  289 bits (740), Expect = 2e-76
 Identities = 141/201 (70%), Positives = 165/201 (82%)
 Frame = -3

Query: 605 MDSSYRQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWYCKALESEVKGRA 426
           M+ + R +CL+L+IP     Q E IFIK  WF S F L ITDG++ W C A E EV+ RA
Sbjct: 1   MEPTPRHSCLKLQIPN----QSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERA 56

Query: 425 SQWDQPVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSP 246
           +QWDQPVSDYI  AER LGF+QPGS YGF DAGDGH+RLSWTFEK+GT LEWR KC  SP
Sbjct: 57  AQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSP 116

Query: 245 DNKKTTSEILDFLMDANIRLSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALY 66
           D++ TT+ +LDFLM+ANIRLSEEVV K QSF+RLK+EAEKCLAQSEKF+NEKAE ESA+Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 65  AKFVGVLNSKKAKLRELRDRL 3
           AKF+GVLNSKKAKLRELRD++
Sbjct: 177 AKFLGVLNSKKAKLRELRDQI 197


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  289 bits (740), Expect = 2e-76
 Identities = 141/201 (70%), Positives = 165/201 (82%)
 Frame = -3

Query: 605 MDSSYRQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWYCKALESEVKGRA 426
           M+ + R +CL+L+IP     Q E IFIK  WF S F L ITDG++ W C A E EV+ RA
Sbjct: 1   MEPTPRHSCLKLQIPN----QSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERA 56

Query: 425 SQWDQPVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSP 246
           +QWDQPVSDYI  AER LGF+QPGS YGF DAGDGH+RLSWTFEK+GT LEWR KC  SP
Sbjct: 57  AQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSP 116

Query: 245 DNKKTTSEILDFLMDANIRLSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALY 66
           D++ TT+ +LDFLM+ANIRLSEEVV K QSF+RLK+EAEKCLAQSEKF+NEKAE ESA+Y
Sbjct: 117 DSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIY 176

Query: 65  AKFVGVLNSKKAKLRELRDRL 3
           AKF+GVLNSKKAKLRELRD++
Sbjct: 177 AKFLGVLNSKKAKLRELRDQI 197


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  286 bits (731), Expect = 3e-75
 Identities = 139/196 (70%), Positives = 162/196 (82%)
 Frame = -3

Query: 590 RQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWYCKALESEVKGRASQWDQ 411
           R TCL+LEIP       E IFIKG WF   F L ITDG+N+W+C A E EV+ RA+QWDQ
Sbjct: 7   RHTCLKLEIP-------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQWDQ 59

Query: 410 PVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKT 231
           PVS YI+ AE+HLGF+ PGS Y F DAG+G+KRLSWTFEK+GT LEWR KC+PSPD KKT
Sbjct: 60  PVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKT 119

Query: 230 TSEILDFLMDANIRLSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVG 51
           T+ ILDFLMDANIRLSEEVVRK QSF++LK EAEKCLAQSEKF+++K E E+A+YAKF+G
Sbjct: 120 TTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKFLG 179

Query: 50  VLNSKKAKLRELRDRL 3
           VLNSKK KLRELRD+L
Sbjct: 180 VLNSKKRKLRELRDQL 195


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  280 bits (717), Expect = 1e-73
 Identities = 135/196 (68%), Positives = 156/196 (79%)
 Frame = -3

Query: 590 RQTCLRLEIPGRENEQQEVIFIKGNWFDSRFELFITDGINTWYCKALESEVKGRASQWDQ 411
           R TCL+LEI        E IF+KG WFDS F L ITDG+N W C A E +VK RA+QWDQ
Sbjct: 14  RHTCLKLEIT-------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWDQ 66

Query: 410 PVSDYIETAERHLGFRQPGSTYGFVDAGDGHKRLSWTFEKQGTTLEWRCKCKPSPDNKKT 231
           PVS+YI  AE +LGF+QPGS Y F DAGD HKRLSWTFEK+GT LEWR KC+PSPDNK T
Sbjct: 67  PVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKMT 126

Query: 230 TSEILDFLMDANIRLSEEVVRKMQSFDRLKLEAEKCLAQSEKFSNEKAELESALYAKFVG 51
           T+ ILDFLMDANIRLSEEVV+K  SF+RLK EA+KCL QSE+F+ EK E ES++YAKF+ 
Sbjct: 127 TAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFLA 186

Query: 50  VLNSKKAKLRELRDRL 3
           VLNSKK KLR+LRD+L
Sbjct: 187 VLNSKKRKLRQLRDQL 202


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