BLASTX nr result

ID: Papaver22_contig00017534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017534
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kD...   119   5e-25
ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ...   119   7e-25
ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|2...   113   4e-23
ref|XP_003571269.1| PREDICTED: signal recognition particle 68 kD...   112   6e-23
ref|NP_568947.1| signal recognition particle subunit SRP68 [Arab...   112   6e-23

>ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kDa protein [Vitis
           vinifera] gi|147791928|emb|CAN67894.1| hypothetical
           protein VITISV_040392 [Vitis vinifera]
           gi|297734504|emb|CBI15751.3| unnamed protein product
           [Vitis vinifera]
          Length = 595

 Score =  119 bits (298), Expect = 5e-25
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   RCFYLAKSYSLAGKRAEAYVLYSRARSLAESTLLKLKAMSSFDKDIIQDLEVLYNNSRSN 182
           RCFYLAKSYSLAGKR EAY LYS ARSLA+  L KL+A S+ D+ +I+ L++LYN+ RSN
Sbjct: 429 RCFYLAKSYSLAGKRTEAYALYSHARSLADDALQKLQASSNNDQTLIKGLKMLYNDCRSN 488

Query: 183 ICIEHAAGIMEEEKAPEKLTKGVSSISLA 269
            CIEHA  IMEEEKAPE L++ +S+ISLA
Sbjct: 489 SCIEHATVIMEEEKAPENLSQKISNISLA 517


>ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
           communis] gi|223550210|gb|EEF51697.1| Signal recognition
           particle 68 kDa protein, putative [Ricinus communis]
          Length = 594

 Score =  119 bits (297), Expect = 7e-25
 Identities = 57/89 (64%), Positives = 75/89 (84%)
 Frame = +3

Query: 3   RCFYLAKSYSLAGKRAEAYVLYSRARSLAESTLLKLKAMSSFDKDIIQDLEVLYNNSRSN 182
           RCFYLAKSYSLAGKR EAY LY RARSL+E+ L K +++++ D+ ++++L+ LYN  RSN
Sbjct: 428 RCFYLAKSYSLAGKRTEAYSLYCRARSLSENALQKFQSLNNTDEIMVKELKTLYNECRSN 487

Query: 183 ICIEHAAGIMEEEKAPEKLTKGVSSISLA 269
            CIEHA+GIME+EKAPE L+K VS+ISL+
Sbjct: 488 SCIEHASGIMEDEKAPENLSKKVSAISLS 516


>ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|222859441|gb|EEE96988.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  113 bits (282), Expect = 4e-23
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   RCFYLAKSYSLAGKRAEAYVLYSRARSLAESTLLKLKAMSSFDKDIIQDLEVLYNNSRSN 182
           RCFYLAKSYS AGKR EAY LY  ARSLAE+ L K + M   D+ + ++L+ LYN  R+N
Sbjct: 436 RCFYLAKSYSSAGKRTEAYALYCHARSLAENALKKFQTMMDTDEAMTKELKTLYNECRAN 495

Query: 183 ICIEHAAGIMEEEKAPEKLTKGVSSISLA 269
            CIEHA GIME+EKAPE L+K +S+ISL+
Sbjct: 496 SCIEHATGIMEDEKAPENLSKKISTISLS 524


>ref|XP_003571269.1| PREDICTED: signal recognition particle 68 kDa protein-like
           [Brachypodium distachyon]
          Length = 603

 Score =  112 bits (280), Expect = 6e-23
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = +3

Query: 3   RCFYLAKSYSLAGKRAEAYVLYSRARSLAESTLLKLKAMSSFDKDIIQDLEVLYNNSRSN 182
           RCFYLAKSYS AGKRAEAY L+  ARSL +S L +L   +S DK +IQDL+ L +N RSN
Sbjct: 439 RCFYLAKSYSSAGKRAEAYALFCYARSLTDSALQQLA--NSSDKALIQDLKALSDNCRSN 496

Query: 183 ICIEHAAGIMEEEKAPEKLTKGVSSISLAE 272
            CIEHA GIME E APEKL+KGVS++SL +
Sbjct: 497 SCIEHATGIMENESAPEKLSKGVSTMSLGD 526


>ref|NP_568947.1| signal recognition particle subunit SRP68 [Arabidopsis thaliana]
           gi|9758397|dbj|BAB08884.1| signal recognition particle
           68kD protein-like [Arabidopsis thaliana]
           gi|15293137|gb|AAK93679.1| putative signal recognition
           particle protein [Arabidopsis thaliana]
           gi|19310613|gb|AAL85037.1| putative signal recognition
           particle protein [Arabidopsis thaliana]
           gi|332010161|gb|AED97544.1| signal recognition particle
           subunit SRP68 [Arabidopsis thaliana]
          Length = 605

 Score =  112 bits (280), Expect = 6e-23
 Identities = 56/88 (63%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   RCFYLAKSYSLAGKRAEAYVLYSRARSLAESTLLKLKAMSSFDKDIIQDLEVLYNNSRSN 182
           RCFYLAKSYSLAGKRAEA+ LYSRARSLAE  L K ++++  D+  IQ+L+ L    R+N
Sbjct: 436 RCFYLAKSYSLAGKRAEAFALYSRARSLAEDALNKFQSIAKKDEGTIQELKTLIKECRAN 495

Query: 183 ICIEHAAGIMEEEKAPEKLTKGVSSISL 266
            CIEHA GIMEEE+APE L+  +S+ISL
Sbjct: 496 SCIEHATGIMEEERAPENLSNRMSTISL 523


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