BLASTX nr result

ID: Papaver22_contig00017428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017428
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    66   6e-09
ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    57   3e-06

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
 Frame = +2

Query: 95  NGSINQGANLSKFLRALSYVKCLTISDGALQVLSFT-HDLKNNLPTFHNLRKLNMSHTAT 271
           NG I+    + + L  +S VKCL+++   L  LS T  D K  LPTFHN+ +L       
Sbjct: 287 NGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYK--LPTFHNMTRLEFLFIGG 344

Query: 272 -NYKALIALLESAPNLESLLLCGLSVSXXXXXXXXXXXNCRYFFDDRWGVHLIRTRCLFL 448
            N+  L   L S+PNLE+L++                        + W + L    CL L
Sbjct: 345 FNWDFLPNFLHSSPNLEALVI--------------ETGYTNELIPEGWLMPLQVPACLVL 390

Query: 449 HLKSVYVKYFTGHPSEGIWLELILKQAAALETITFISPDPGMYVKLAI-KQLKSLPRASA 625
           HLK + ++   G   E   +E +LK A  L+ +T    +  M  +  + K+L  LPR S 
Sbjct: 391 HLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSR 450

Query: 626 SC 631
           SC
Sbjct: 451 SC 452


>ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355492442|gb|AES73645.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 470

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 4/204 (1%)
 Frame = +2

Query: 32  ILDSGLTKDVSFGFEDNYTSANGSINQGANLSKFLRALSY----VKCLTISDGALQVLSF 199
           IL+   T+ + F  +D++T   G     + L+K     +Y    +K L   +     L+ 
Sbjct: 267 ILEDLHTEHLKFSLKDSFTHQEGETLSLSKLTKAEMPYTYCHFPLKALHNVEKLHIELNK 326

Query: 200 THDLKNNLPTFHNLRKLNMSHTATNYKALIALLESAPNLESLLLCGLSVSXXXXXXXXXX 379
            +   + +PTFHNL KL +    +N+  L+ +L   P LE+L L                
Sbjct: 327 MYRSFDEIPTFHNLTKLKLHSINSNWNLLVQVLNHCPKLENLEL-----------DEGST 375

Query: 380 XNCRYFFDDRWGVHLIRTRCLFLHLKSVYVKYFTGHPSEGIWLELILKQAAALETITFIS 559
            + R      W       +CL LHLK+   + F G   E +    ILK A  L+T++   
Sbjct: 376 IDRRLHVQKNWKDPKFVPQCLSLHLKTCIFQNFIGQQGELMSTIYILKNARVLQTMSIC- 434

Query: 560 PDPGMYVKLAIKQLKSLPRASASC 631
              G+      ++L   PR S  C
Sbjct: 435 ---GVKALEVERELSLCPRVSPIC 455


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