BLASTX nr result

ID: Papaver22_contig00017357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017357
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|NP_568185.1| Mitochondrial transcription termination factor ...   108   5e-22
ref|XP_002527654.1| RNA binding protein, putative [Ricinus commu...   107   8e-22
emb|CAN77550.1| hypothetical protein VITISV_017394 [Vitis vinifera]   107   1e-21
ref|XP_002871294.1| mitochondrial transcription termination fact...   106   2e-21

>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/106 (47%), Positives = 75/106 (70%)
 Frame = +1

Query: 1   EEILFAFKMYPHCMGCSTKKISLTMDYFVNQMGYNASFMARYPIFFGFSLEKRIIPRYSV 180
           ++I  AFK +PHCM  S KKI L MD+FVN+MG  +  +A+ P+   FSLEKRI+PR  V
Sbjct: 262 DDIFAAFKKHPHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRV 321

Query: 181 YQILVSKGLIKDQIHICSLLNMNGDAFLEKFVVKYEKEAPELLKIY 318
            ++L++KGL+K  + + ++L      FL++FV+KYE+E P LL++Y
Sbjct: 322 IRVLMNKGLVKKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRVY 367


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/106 (50%), Positives = 74/106 (69%)
 Frame = +1

Query: 1   EEILFAFKMYPHCMGCSTKKISLTMDYFVNQMGYNASFMARYPIFFGFSLEKRIIPRYSV 180
           ++I+ AFK +PHCM  S +KI+ TM+YFVN+M      +A+ P+   FSLEKRIIPR SV
Sbjct: 294 DDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSV 353

Query: 181 YQILVSKGLIKDQIHICSLLNMNGDAFLEKFVVKYEKEAPELLKIY 318
            ++LVS GL+K+   + SLL      FLEK V+KYE+E PEL+ +Y
Sbjct: 354 TKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399


>ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
            gi|223532959|gb|EEF34725.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 830

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/107 (46%), Positives = 76/107 (71%)
 Frame = +1

Query: 1    EEILFAFKMYPHCMGCSTKKISLTMDYFVNQMGYNASFMARYPIFFGFSLEKRIIPRYSV 180
            +EIL AF+ YPHCM  S + I+  MD+ VN+MG+  + + + P +F +SLEKRI PR SV
Sbjct: 703  DEILSAFRKYPHCMSFSEESITNKMDFLVNRMGWQPAVILKNPAYFTYSLEKRIAPRCSV 762

Query: 181  YQILVSKGLIKDQIHICSLLNMNGDAFLEKFVVKYEKEAPELLKIYN 321
             ++L+ KGLIK +I +  +L    D+FLEK+V KY+++ PELL +++
Sbjct: 763  VRVLLLKGLIKPKICLVPILAPTDDSFLEKYVFKYQEQVPELLDVFH 809


>emb|CAN77550.1| hypothetical protein VITISV_017394 [Vitis vinifera]
          Length = 188

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/106 (51%), Positives = 70/106 (66%)
 Frame = +1

Query: 1   EEILFAFKMYPHCMGCSTKKISLTMDYFVNQMGYNASFMARYPIFFGFSLEKRIIPRYSV 180
           EEI  AF   P CM  S  KI  TMD+FVN+MG  +S +AR P+    SLEKRIIPRYSV
Sbjct: 63  EEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLISLSLEKRIIPRYSV 122

Query: 181 YQILVSKGLIKDQIHICSLLNMNGDAFLEKFVVKYEKEAPELLKIY 318
            Q+L+SKGLIK+   +  L       FL KFV  +++EAP+L+K+Y
Sbjct: 123 IQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLY 168


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/106 (50%), Positives = 73/106 (68%)
 Frame = +1

Query: 1   EEILFAFKMYPHCMGCSTKKISLTMDYFVNQMGYNASFMARYPIFFGFSLEKRIIPRYSV 180
           ++I+ AFK +PHCM  S +KI+ TM++FVN+M      +A  P+   FSLEKRIIPR SV
Sbjct: 293 DDIMCAFKKHPHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSV 352

Query: 181 YQILVSKGLIKDQIHICSLLNMNGDAFLEKFVVKYEKEAPELLKIY 318
            ++LVS GL+K+   + SLL      FLEK V+KYE+E PEL+ +Y
Sbjct: 353 TKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDVY 398


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