BLASTX nr result

ID: Papaver22_contig00017292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017292
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    60   4e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    56   5e-06
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    55   9e-06

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
 Frame = +2

Query: 2   VEVYSLGKDSGWRDVGEVGYFIV--PSDENGNNCVNGSLHWL----KYETREIVAFDLAD 163
           V+V +LG  + WR +G+V Y +   PS+      VNG LHW+    +Y TR IV+FDLAD
Sbjct: 208 VQVLTLGSPT-WRSLGKVSYQLDRWPSEA----LVNGRLHWVTRPRRYVTRFIVSFDLAD 262

Query: 164 EEFHFVHTPPGLXXXXXXXXXXRIFVMRGCLCLACEYEKG-ADLWILKRSEKKISGSCNP 340
           E+F  +  P              + V+ GCL  A     G  ++W++K  + K S     
Sbjct: 263 EQFREIPKP---DCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESW-IKE 318

Query: 341 FNAKDHYYK---------CRSWSKELRLGILGVNRKFKISGLTKEGKVILRFDLGLLTQY 493
           FN   H  K          R W    +       R  ++  L K G+++L +   +L  Y
Sbjct: 319 FNIGAHLPKGLKQDVNRPHRIWRNAPK------GRGVRLLCLLKNGEILLEYKGRVLVSY 372

Query: 494 N 496
           N
Sbjct: 373 N 373


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
 Frame = +2

Query: 2   VEVYSLGKDSGWRDVGEVGYFIVPSDENGNNCVNGSLHWLKYETRE------IVAFDLAD 163
           V+V+SL K+S WR + ++ Y ++   ENG    NG+LHWL  +  +      IVA DL  
Sbjct: 173 VKVFSLRKNS-WRRIADMPYCVLYPGENGIYA-NGALHWLVSQDPDSTVADTIVALDLGV 230

Query: 164 EEFHFVHTPPGLXXXXXXXXXXRIFVMRGCL-CLACEYEKGADLWILKRSEKKISGSCNP 340
           E++H V  P  +           + V++GCL  LA    +  D+W++             
Sbjct: 231 EDYHVVPKPEFVDMNCNMG----VGVLQGCLSLLAYARSERVDVWVM------------- 273

Query: 341 FNAKDHYYKCRSWSK---ELRLGILGVNRKFKISGLTKEGKVIL 463
               + Y    SWSK     RL ++G+ R  K    +K G  +L
Sbjct: 274 ----EEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVL 313


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   VEVYSLGKDSGWRDVGEVGYFIVPSDENGNNCVNGSLHWLKYE-----TREIVAFDLADE 166
           V++ +LG   GWR +G+V Y +V         VNG LHW+         R +V+FDL DE
Sbjct: 207 VQILTLGCP-GWRSLGKVSYRLVR--RASETLVNGRLHWVSRPCRNKPARRLVSFDLTDE 263

Query: 167 EFHFVHTPPGLXXXXXXXXXXRIFVMRGCLCLA--CEYEKGADLWILKRSEKKISGSCNP 340
           +F  V  P              + V+RGCL +A  C Y +  ++W++K            
Sbjct: 264 QFREVPKP---DCGGLNRCDYHLAVLRGCLSVAVYCNYGR-LEIWVMKE----------- 308

Query: 341 FNAKDHYYKCRSWSKELRLG 400
           +N K+      SW KE  +G
Sbjct: 309 YNVKE------SWVKEYNIG 322


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
 Frame = +2

Query: 2   VEVYSLGKDSGWRDVGEVGYFIVPSDENGNNCVNGSLHWLKYE-----TREIVAFDLADE 166
           V++ +LG    WR +G+V Y +V         VNG LHW+         R +V+FDL DE
Sbjct: 208 VQILTLGCPE-WRSLGKVSYRLVRRASGA--LVNGRLHWISRPCRNKPARRLVSFDLTDE 264

Query: 167 EFHFVHTPPGLXXXXXXXXXXRIFVMRGCLCLA--CEYEKGADLWILKRSEKKISGSCNP 340
           +F  V  P              + V+RGCL  A  C Y +  ++W++K    K S     
Sbjct: 265 QFREVSKP---DCGGLNRCNYHLVVLRGCLSAAVYCNYGR-LEIWVMKEYNVKESW-VKE 319

Query: 341 FNAKDHYYKCRSWSKELRLGILGVNRKFKISG---LTKEGKVILRFDLGLLTQYN 496
           +N   +  K    +++ +L I   +   ++ G   + K G+++L +   +L  Y+
Sbjct: 320 YNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYD 374


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