BLASTX nr result

ID: Papaver22_contig00017181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017181
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34639.3| unnamed protein product [Vitis vinifera]              225   4e-57
ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2...   224   7e-57
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   206   1e-51
ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...   191   5e-47

>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  225 bits (573), Expect = 4e-57
 Identities = 120/182 (65%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3    GSAPSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSHPKNDGARVPFFSDE 182
            G+APSIQYGIS+MPVVDKPAPVR+SSLLTSRHLSQRRIRLPAR+ HPKND  +VPFFSD+
Sbjct: 689  GTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHPKNDAPKVPFFSDD 748

Query: 183  EEAPSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKSKDTNNI--PLHENGKLSEKDS 356
            EE PSTPKADALF+PRENPR+LVIRP+E W+ R++AEK+        P+HENGK+SE+  
Sbjct: 749  EETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENGKVSEE-- 806

Query: 357  GSSLNGSINQEKHKINPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLN 536
               LNGS   +K   + +L ENG  KER    K +QK NG VH+DHS   Q GDSYITL 
Sbjct: 807  --GLNGSNAGDK---DANLVENGLAKERIHTMKPNQKPNG-VHDDHS--IQKGDSYITLT 858

Query: 537  GH 542
            GH
Sbjct: 859  GH 860


>ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1|
            predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  224 bits (571), Expect = 7e-57
 Identities = 117/181 (64%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    GSAPSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSHPKNDGARVPFFSDE 182
            G+ PS+QYGIS+MPV++KP+PVRVSSLLTSRHLSQRRIRLPAR+ +PK+DG +VPFFSDE
Sbjct: 647  GTTPSVQYGISSMPVIEKPSPVRVSSLLTSRHLSQRRIRLPARKYYPKHDGPKVPFFSDE 706

Query: 183  EEAPSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKSKDTN-NIPLHENGKLSEKDSG 359
            EE PSTPKADALFIPRENPRALVIRP++ W SR SAEK+   N + P+HENGK SE D  
Sbjct: 707  EETPSTPKADALFIPRENPRALVIRPMDQWPSRASAEKASPVNASAPVHENGKNSESDFA 766

Query: 360  SSLNGSINQEKHKINPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLNG 539
            +  NG    +K+K   +L ENG  KE+    K +QK NG VHEDHS   Q  +SY+TL+G
Sbjct: 767  NLSNGYTAGDKNK---NLAENGVIKEQAPHVKVNQKPNG-VHEDHS--AQKEESYMTLSG 820

Query: 540  H 542
            H
Sbjct: 821  H 821


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Vitis vinifera]
          Length = 1013

 Score =  206 bits (525), Expect = 1e-51
 Identities = 111/182 (60%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3    GSAPSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSHPKNDGARVPFFSDE 182
            G+APSIQYGIS+MPVVDKPAPVR+SSLLTSRHLSQRRIRLPAR+ HPKND  +VPFFSD+
Sbjct: 672  GTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHPKNDAPKVPFFSDD 731

Query: 183  EEAPSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKSKDTNNI--PLHENGKLSEKDS 356
            EE PSTPKADALF+PRENPR+LVIRP+E W+ R++AEK+        P+HEN        
Sbjct: 732  EETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENA------- 784

Query: 357  GSSLNGSINQEKHKINPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLN 536
                             +L ENG  KER    K +QK NG VH+DHS   Q GDSYITL 
Sbjct: 785  -----------------NLVENGLAKERIHTMKPNQKPNG-VHDDHS--IQKGDSYITLT 824

Query: 537  GH 542
            GH
Sbjct: 825  GH 826


>ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|222846239|gb|EEE83786.1|
            predicted protein [Populus trichocarpa]
          Length = 942

 Score =  202 bits (513), Expect = 3e-50
 Identities = 110/181 (60%), Positives = 134/181 (74%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    GSAPSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSHPKNDGARVPFFSDE 182
            G+ PS+QYGIS MPVV+KP+P+R+SSLLTSRHLSQRRIRLP R+ +PK+DG +VPFFSDE
Sbjct: 585  GTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKYYPKHDGPKVPFFSDE 644

Query: 183  EEAPSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKSKDTN-NIPLHENGKLSEKDSG 359
            EE PSTPKADALFIPRENPRALVIRP++ W SR SAEK+   N + P+HEN         
Sbjct: 645  EETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLNASAPVHENS-------- 696

Query: 360  SSLNGSINQEKHKINPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLNG 539
               NGS   +K+K   +  ENG  KE+    K +QK NG VHEDH+  TQ  +SY+TL+G
Sbjct: 697  ---NGSTAGDKNK---NSAENGVIKEQ---VKVNQKPNG-VHEDHA--TQKEESYMTLSG 744

Query: 540  H 542
            H
Sbjct: 745  H 745


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Glycine max]
          Length = 1038

 Score =  191 bits (486), Expect = 5e-47
 Identities = 105/182 (57%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3    GSAPSIQYGISNMPVVDKPAPVRVSSLLTSRHLSQRRIRLPARRSHPKNDGARVPFFSDE 182
            G+ PSIQYGIS+MP +DKPAPVR+SSLLTSRHLSQRRIRLP R+ H KNDG +V FFSD+
Sbjct: 680  GTTPSIQYGISSMPALDKPAPVRISSLLTSRHLSQRRIRLPVRKYHSKNDGPKVAFFSDD 739

Query: 183  EEAPSTPKADALFIPRENPRALVIRPLEHWTSRTSAEKS--KDTNNIPLHENGKLSEKDS 356
            E+ P+TPKADALFIPRENPRAL+I P+E W  + S + S  KD  +IP++ENG +S KD+
Sbjct: 740  EDTPTTPKADALFIPRENPRALIICPMEQWPGKVSEKPSTFKD-RSIPVNENGNIS-KDA 797

Query: 357  GSSLNGSINQEKHKINPSLGENGHDKERTQPAKSSQKANGVVHEDHSKNTQNGDSYITLN 536
              + + + +Q+K K   S  ENG  KE+ QP  +   +NG  +EDHS   Q  D Y TL+
Sbjct: 798  SVTPDRTTSQDKDK-EKSAVENGVVKEQAQPITTKPTSNG-SNEDHS--LQKADVYKTLS 853

Query: 537  GH 542
            GH
Sbjct: 854  GH 855


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