BLASTX nr result

ID: Papaver22_contig00016739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016739
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ...   130   1e-28
ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu...   127   1e-27
ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   124   6e-27
ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi...   123   2e-26

>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
           gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
           putative [Ricinus communis]
          Length = 628

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = -3

Query: 443 RDAITKNLILREDQLPHKVLYPKTKKKSNTLGDDIFISDDIFRNSSDKRAPLQPPVRKAL 264
           RDAITKNLILREDQLP K+LYPKTKKK N  GDD F  DDIF + +DKRAP +PP+RKAL
Sbjct: 550 RDAITKNLILREDQLPQKLLYPKTKKKVNKQGDDFFAVDDIFSHHTDKRAPFRPPIRKAL 609

Query: 263 AVFSGKRNPNDNHYSRAKH 207
           AVFSG+RNPNDNHYSR K+
Sbjct: 610 AVFSGRRNPNDNHYSRPKN 628


>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
          Length = 617

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/80 (76%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = -3

Query: 443 RDAITKNLILREDQLPHKVLYPKTKKKSNTLGDDIFISDDIF-RNSSDKRAPLQPPVRKA 267
           RDAITKNL+LREDQLP K L+PKTKKK N  GD+ F  DD F  +++DKRAPLQPPVR+A
Sbjct: 537 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQA 596

Query: 266 LAVFSGKRNPNDNHYSRAKH 207
           LAVFSGKRNPNDNHYSR+KH
Sbjct: 597 LAVFSGKRNPNDNHYSRSKH 616


>ref|XP_002303575.1| predicted protein [Populus trichocarpa] gi|222841007|gb|EEE78554.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 443 RDAITKNLILREDQLPHKVLYPKTKKKSNTLGDDIF-ISDDIFRNSSDKRAPLQPPVRKA 267
           RDAITKNLILREDQLP K LYPKTKKK N  GDDIF + DDIF + +DK+ P +PP+R+A
Sbjct: 509 RDAITKNLILREDQLPQKFLYPKTKKKVNKEGDDIFSVRDDIFGHHNDKKTPFRPPIRQA 568

Query: 266 LAVFSGKRNPNDNHYSRAKH 207
           LAVFSGKRNPNDNHY+R KH
Sbjct: 569 LAVFSGKRNPNDNHYARPKH 588


>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
           [Cucumis sativus]
          Length = 617

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 443 RDAITKNLILREDQLPHKVLYPKTKKKSNTLGDDIFISDDIF-RNSSDKRAPLQPPVRKA 267
           RDAITKNL+LREDQLP K L+P TKKK N  GD+ F  DD F  +++DKRAPLQPPVR+A
Sbjct: 537 RDAITKNLVLREDQLPQKFLHPXTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQA 596

Query: 266 LAVFSGKRNPNDNHYSRAKH 207
           LAVFSGKRNPNDNHYSR+KH
Sbjct: 597 LAVFSGKRNPNDNHYSRSKH 616


>ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]
          Length = 633

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/78 (73%), Positives = 68/78 (87%)
 Frame = -3

Query: 443 RDAITKNLILREDQLPHKVLYPKTKKKSNTLGDDIFISDDIFRNSSDKRAPLQPPVRKAL 264
           RDAITKN ILREDQLPHK+L+PKTKKK+N  GD+ F SDD F + +DK+  L+PPVR+AL
Sbjct: 555 RDAITKNPILREDQLPHKLLHPKTKKKANKPGDEFFASDDFFSHHTDKKTSLRPPVREAL 614

Query: 263 AVFSGKRNPNDNHYSRAK 210
           AVFSGKRNPNDNH+SR+K
Sbjct: 615 AVFSGKRNPNDNHFSRSK 632


Top