BLASTX nr result
ID: Papaver22_contig00016487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00016487
(467 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001767264.1| condensin complex component SMC1 [Physcomitr... 70 2e-23
ref|XP_003573236.1| PREDICTED: LOW QUALITY PROTEIN: structural m... 77 1e-12
ref|NP_191027.3| structural maintenance of chromosomes 1 [Arabid... 76 3e-12
ref|NP_001190092.1| structural maintenance of chromosomes 1 [Ara... 76 3e-12
emb|CAB77587.1| structural maintenance of chromosomes (SMC)-like... 76 3e-12
>ref|XP_001767264.1| condensin complex component SMC1 [Physcomitrella patens subsp.
patens] gi|162681519|gb|EDQ67945.1| condensin complex
component SMC1 [Physcomitrella patens subsp. patens]
Length = 1247
Score = 70.1 bits (170), Expect(2) = 2e-23
Identities = 45/98 (45%), Positives = 57/98 (58%)
Frame = +1
Query: 172 GGAAKLIFDVIQYPFCIACAYAYNGTLLLADMNLCICRLLNMFTYL*KWLSFLL*CKLII 351
GG+AKL++DVIQYPF NL + L +MF FL +L
Sbjct: 600 GGSAKLVYDVIQYPF-----------------NLNV--LTSMF--------FL---RLPS 629
Query: 352 FVYHTFDPSLERAILYAVGNTLVCDKLEEAKDISWSRE 465
F FDP+LERA+LYAVGNTLVCD+L+EAK ++W E
Sbjct: 630 FTRLIFDPALERAVLYAVGNTLVCDQLDEAKRLAWGSE 667
Score = 63.9 bits (154), Expect(2) = 2e-23
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 59 NSGKECIKYMKQQQLPPQTFIPLQSVRVKPVSEKLRTL 172
++GKECIKY+K+ +L PQTFIPLQSVRVKPV EKLR L
Sbjct: 562 STGKECIKYLKEHRLQPQTFIPLQSVRVKPVHEKLRAL 599
>ref|XP_003573236.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
chromosomes protein 1A-like [Brachypodium distachyon]
Length = 1257
Score = 77.4 bits (189), Expect = 1e-12
Identities = 46/121 (38%), Positives = 59/121 (48%)
Frame = +1
Query: 103 PPSDFYXXXXXXXXXXXXXXXNFGGAAKLIFDVIQYPFCIACAYAYNGTLLLADMNLCIC 282
PP F GG+A+LIFDVIQYPF + C
Sbjct: 586 PPQTFIPLQSVRVKPIIEKLRTLGGSAQLIFDVIQYPFFFPVSXC--------------C 631
Query: 283 RLLNMFTYL*KWLSFLL*CKLIIFVYHTFDPSLERAILYAVGNTLVCDKLEEAKDISWSR 462
+ F++ F+Y+TFD +LE+A+LYAVGNTLVCDKL+EAK +SWS
Sbjct: 632 LMHASFSFH--------------FIYYTFDRALEKAVLYAVGNTLVCDKLDEAKTLSWSG 677
Query: 463 E 465
E
Sbjct: 678 E 678
Score = 70.1 bits (170), Expect = 2e-10
Identities = 31/38 (81%), Positives = 37/38 (97%)
Frame = +2
Query: 59 NSGKECIKYMKQQQLPPQTFIPLQSVRVKPVSEKLRTL 172
++GKECIKY+K+Q+LPPQTFIPLQSVRVKP+ EKLRTL
Sbjct: 571 STGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTL 608
>ref|NP_191027.3| structural maintenance of chromosomes 1 [Arabidopsis thaliana]
gi|332645742|gb|AEE79263.1| structural maintenance of
chromosomes 1 [Arabidopsis thaliana]
Length = 1238
Score = 75.9 bits (185), Expect = 3e-12
Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 103 PPSDFYXXXXXXXXXXXXXXXNFGGAAKLIFDVIQYPFCIACAYAYNGTLLLADMNLCIC 282
PP F N GG AKL+FDVIQYP I+
Sbjct: 571 PPMTFIPLQSVRVKQVFERLRNLGGTAKLVFDVIQYPLHISEV----------------- 613
Query: 283 RLLNMFTYL*KWLSFLL*CKLIIFV--YHTFDPSLERAILYAVGNTLVCDKLEEAKDISW 456
K+ IFV Y TFDP LE+A+LYAVGNTLVCD+LEEAK +SW
Sbjct: 614 ------------------SKIYIFVLNYSTFDPELEKAVLYAVGNTLVCDELEEAKVLSW 655
Query: 457 SRE 465
S E
Sbjct: 656 SGE 658
Score = 63.2 bits (152), Expect = 2e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 59 NSGKECIKYMKQQQLPPQTFIPLQSVRVKPVSEKLRTL 172
N+GK+CIKY+K+Q+LPP TFIPLQSVRVK V E+LR L
Sbjct: 556 NTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNL 593
>ref|NP_001190092.1| structural maintenance of chromosomes 1 [Arabidopsis thaliana]
gi|332645744|gb|AEE79265.1| structural maintenance of
chromosomes 1 [Arabidopsis thaliana]
Length = 1239
Score = 75.9 bits (185), Expect = 3e-12
Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 103 PPSDFYXXXXXXXXXXXXXXXNFGGAAKLIFDVIQYPFCIACAYAYNGTLLLADMNLCIC 282
PP F N GG AKL+FDVIQYP I+
Sbjct: 572 PPMTFIPLQSVRVKQVFERLRNLGGTAKLVFDVIQYPLHISEV----------------- 614
Query: 283 RLLNMFTYL*KWLSFLL*CKLIIFV--YHTFDPSLERAILYAVGNTLVCDKLEEAKDISW 456
K+ IFV Y TFDP LE+A+LYAVGNTLVCD+LEEAK +SW
Sbjct: 615 ------------------SKIYIFVLNYSTFDPELEKAVLYAVGNTLVCDELEEAKVLSW 656
Query: 457 SRE 465
S E
Sbjct: 657 SGE 659
Score = 63.2 bits (152), Expect = 2e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 59 NSGKECIKYMKQQQLPPQTFIPLQSVRVKPVSEKLRTL 172
N+GK+CIKY+K+Q+LPP TFIPLQSVRVK V E+LR L
Sbjct: 557 NTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNL 594
>emb|CAB77587.1| structural maintenance of chromosomes (SMC)-like protein
[Arabidopsis thaliana]
Length = 1265
Score = 75.9 bits (185), Expect = 3e-12
Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +1
Query: 103 PPSDFYXXXXXXXXXXXXXXXNFGGAAKLIFDVIQYPFCIACAYAYNGTLLLADMNLCIC 282
PP F N GG AKL+FDVIQYP I+
Sbjct: 579 PPMTFIPLQSVRVKQVFERLRNLGGTAKLVFDVIQYPLHISEV----------------- 621
Query: 283 RLLNMFTYL*KWLSFLL*CKLIIFV--YHTFDPSLERAILYAVGNTLVCDKLEEAKDISW 456
K+ IFV Y TFDP LE+A+LYAVGNTLVCD+LEEAK +SW
Sbjct: 622 ------------------SKIYIFVLNYSTFDPELEKAVLYAVGNTLVCDELEEAKVLSW 663
Query: 457 SRE 465
S E
Sbjct: 664 SGE 666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 59 NSGKECIKYMKQQQLPPQTFIPLQSVRVKPVSEKLRTL 172
N+GK+CIKY+K+Q+LPP TFIPLQSVRVK V E+LR L
Sbjct: 564 NTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNL 601