BLASTX nr result

ID: Papaver22_contig00016311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016311
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    58   7e-07

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +3

Query: 234  QNIISLHLPKQPKADQLVWPYSKTGNYTSKTGY---SKLISQTTNSPINRTPTQQPVDYK 404
            +NI++L    +   D+  W YS++G+Y+ K+GY   +++I+Q  N      P+  P+ ++
Sbjct: 994  ENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPI-FQ 1052

Query: 405  SIWKLRCPPKIRLFLWK 455
             IWKL  PPKI  FLW+
Sbjct: 1053 QIWKLDVPPKIHHFLWR 1069


Top