BLASTX nr result

ID: Papaver22_contig00016276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016276
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   245   3e-63
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   245   3e-63
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   245   3e-63
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   245   3e-63
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   243   9e-63

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/137 (90%), Positives = 127/137 (92%)
 Frame = -1

Query: 413 AAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 234
           AAALQSALIK          RTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 430 AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 489

Query: 233 MPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 54
           MPEWKKDA+GKALTFGQRSKLS+QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT
Sbjct: 490 MPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 549

Query: 53  TQVTQYLAEAGYTTKGK 3
           TQVTQYLAEAGYTT+GK
Sbjct: 550 TQVTQYLAEAGYTTRGK 566


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/137 (90%), Positives = 127/137 (92%)
 Frame = -1

Query: 413 AAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 234
           AAALQSALIK          RTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 433 AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 492

Query: 233 MPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 54
           MPEWKKDA+GKALTFGQRSKLS+QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT
Sbjct: 493 MPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 552

Query: 53  TQVTQYLAEAGYTTKGK 3
           TQVTQYLAEAGYTT+GK
Sbjct: 553 TQVTQYLAEAGYTTRGK 569


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/137 (90%), Positives = 127/137 (92%)
 Frame = -1

Query: 413 AAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 234
           AAALQSALIK          RTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 435 AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 494

Query: 233 MPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 54
           MPEWKKDA+GKALTFGQRSKLS+QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT
Sbjct: 495 MPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 554

Query: 53  TQVTQYLAEAGYTTKGK 3
           TQVTQYLAEAGYTT+GK
Sbjct: 555 TQVTQYLAEAGYTTRGK 571


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/137 (90%), Positives = 127/137 (92%)
 Frame = -1

Query: 413 AAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 234
           AAALQSALIK          RTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 442 AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 501

Query: 233 MPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 54
           MPEWKKDA+GKALTFGQRSKLS+QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT
Sbjct: 502 MPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 561

Query: 53  TQVTQYLAEAGYTTKGK 3
           TQVTQYLAEAGYTT+GK
Sbjct: 562 TQVTQYLAEAGYTTRGK 578


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  243 bits (621), Expect = 9e-63
 Identities = 122/137 (89%), Positives = 127/137 (92%)
 Frame = -1

Query: 413 AAALQSALIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 234
           AAALQSALIK          RTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 429 AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 488

Query: 233 MPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 54
           MPEWKKDA+GKALT+GQRSKLS+QEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKT
Sbjct: 489 MPEWKKDAFGKALTYGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 548

Query: 53  TQVTQYLAEAGYTTKGK 3
           TQVTQYLAEAGYTT+GK
Sbjct: 549 TQVTQYLAEAGYTTRGK 565


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