BLASTX nr result

ID: Papaver22_contig00016219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016219
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...    91   1e-16
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    91   1e-16
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]    91   1e-16
ref|XP_002318930.1| global transcription factor group [Populus t...    90   2e-16
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752...    90   2e-16

>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1050

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 14/169 (8%)
 Frame = -2

Query: 470  LLHFHLHDPIKVGREKRRNIQFHL-----VQTSVGQRRSYNSSDTIMKEKQTRDRAR--Y 312
            LLHFHLH+ I VG +K +++QF++     VQT  G +RS    D I +E++ RDR     
Sbjct: 723  LLHFHLHNHIMVGNKKTKDVQFYVEVMESVQTLGGGKRSAYDPDEIEEEQRERDRKNKIN 782

Query: 311  GDLENFIIDVQDKWRFIPVYHYPFVGAELHKRDEFR----GHLPSKPATVFHLTFAALVG 144
             D ++F+  V D W         F G +L      R      +P K ++    T + LV 
Sbjct: 783  MDFQSFVNRVNDLWS-----QSQFSGLDLEFDQPLRELGFHGVPYKTSSFIVPTSSCLVE 837

Query: 143  LVDEPFVVADLDEIEIVYLR---LKPEVMDMTIVFQNLKRDLVQINSIP 6
            L++ PF+V  L EIEIV L    L  +  DMTIVF++ KRD+++I+SIP
Sbjct: 838  LIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIP 886


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
 Frame = -2

Query: 470  LLHFHLHDPIKVGREKRRNIQF-----HLVQTSVGQRRSYNSSDTIMKEKQTRDRAR--Y 312
            LLHFHLH+ I VG +K +++QF      +VQT  G +RS    D I +E++ RDR     
Sbjct: 741  LLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKIN 800

Query: 311  GDLENFIIDVQDKWRFIPVYHYPFVGAELHKRDEFR----GHLPSKPATVFHLTFAALVG 144
             D +NF+  V D W         F G +L      R      +P K +     T + LV 
Sbjct: 801  MDFQNFVNRVNDLWG-----QPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVE 855

Query: 143  LVDEPFVVADLDEIEIVYLR---LKPEVMDMTIVFQNLKRDLVQINSIP 6
            L++ PF+V  L EIEIV L    L  +  DMTIVF++ KRD+++I+SIP
Sbjct: 856  LIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIP 904


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
 Frame = -2

Query: 470  LLHFHLHDPIKVGREKRRNIQF-----HLVQTSVGQRRSYNSSDTIMKEKQTRDRAR--Y 312
            LLHFHLH+ I VG +K +++QF      +VQT  G +RS    D I +E++ RDR     
Sbjct: 689  LLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKIN 748

Query: 311  GDLENFIIDVQDKWRFIPVYHYPFVGAELHKRDEFR----GHLPSKPATVFHLTFAALVG 144
             D +NF+  V D W         F G +L      R      +P K +     T + LV 
Sbjct: 749  MDFQNFVNRVNDLWG-----QPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVE 803

Query: 143  LVDEPFVVADLDEIEIVYLR---LKPEVMDMTIVFQNLKRDLVQINSIP 6
            L++ PF+V  L EIEIV L    L  +  DMTIVF++ KRD+++I+SIP
Sbjct: 804  LIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIP 852


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
 Frame = -2

Query: 470  LLHFHLHDPIKVGREKRRNIQFH-----LVQTSVGQRRSYNSSDTIMKEKQTRDRAR--Y 312
            LLHFHLH+ I VG +K +++QF+     +VQT  G +RS    D I +E++ RDR     
Sbjct: 737  LLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKIN 796

Query: 311  GDLENFIIDVQDKWRFIPVYHYPFVGAELHKRDEFR----GHLPSKPATVFHLTFAALVG 144
             D ++F+  V D W         F G +L      R      +P K  +    T + LV 
Sbjct: 797  MDFQSFVNRVNDLWS-----QPQFSGLDLEFDQPLRELGFHGVPHKVTSFIVPTSSCLVE 851

Query: 143  LVDEPFVVADLDEIEIVYLR---LKPEVMDMTIVFQNLKRDLVQINSIP 6
            LV+ PF+V  L EIEIV L    L  +  DMTIVF++ KRD+++I+SIP
Sbjct: 852  LVETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIP 900


>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
            gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16; AltName:
            Full=Global transcription factor group C protein 102
            gi|24021798|gb|AAN41252.1| global transcription factor
            group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
            complex subunit SPT16 isoform 1 [Zea mays]
            gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
            isoform 2 [Zea mays]
          Length = 1055

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
 Frame = -2

Query: 470  LLHFHLHDPIKVGREKRRNIQFH-----LVQTSVGQRRSYNSSDTIMKEKQTRDRAR--Y 312
            LLHFHLH+ I VG +K +++QF+     +VQT  G RRS    D I +E++ RDR     
Sbjct: 725  LLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRIN 784

Query: 311  GDLENFIIDVQDKWRFIPVYHYPFVGAELH-----KRDEFRGHLPSKPATVFHLTFAALV 147
             D +NF+  V D W         F G +L      +   F G +P K +     T   LV
Sbjct: 785  MDFQNFVNKVNDHWS-----QPQFKGLDLEFDVPLRELGFHG-VPYKASAFIIPTSTCLV 838

Query: 146  GLVDEPFVVADLDEIEIVYLR---LKPEVMDMTIVFQNLKRDLVQINSIP 6
             L++ PF+V  L EIEIV L       +  DM IVF++ K+D+++I+SIP
Sbjct: 839  ELIETPFLVVSLSEIEIVNLERVGFGTKNFDMAIVFKDFKKDVLRIDSIP 888


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