BLASTX nr result

ID: Papaver22_contig00016167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016167
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269746.1| PREDICTED: trafficking protein particle comp...   127   1e-27
ref|XP_004157272.1| PREDICTED: trafficking protein particle comp...   123   2e-26
ref|XP_004135644.1| PREDICTED: trafficking protein particle comp...   123   2e-26
ref|XP_002512289.1| trafficking protein particle complex subunit...   114   8e-24
ref|XP_003521728.1| PREDICTED: trafficking protein particle comp...   113   2e-23

>ref|XP_002269746.1| PREDICTED: trafficking protein particle complex subunit 6B [Vitis
           vinifera] gi|147767146|emb|CAN75647.1| hypothetical
           protein VITISV_031270 [Vitis vinifera]
           gi|298204986|emb|CBI34293.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = -3

Query: 518 DNRFRWLTRMSIDPVPVIVTDSSQDPSSVGATENKAEQATSMHLYFPCGLIRGALSNLGI 339
           DN+FRWL+RMS+DP P   T S+QDPS+    ENKA QATSMHLYFPCG+IRGALSNLGI
Sbjct: 97  DNKFRWLSRMSVDPSPEN-TGSAQDPST---DENKAAQATSMHLYFPCGIIRGALSNLGI 152

Query: 338 PCAVSADMSNLPACSFVIRIK 276
           PCAVSAD+SNLPACSFV+RIK
Sbjct: 153 PCAVSADISNLPACSFVVRIK 173


>ref|XP_004157272.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Cucumis sativus]
          Length = 155

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/81 (76%), Positives = 68/81 (83%)
 Frame = -3

Query: 518 DNRFRWLTRMSIDPVPVIVTDSSQDPSSVGATENKAEQATSMHLYFPCGLIRGALSNLGI 339
           DNRFRWLTRMS+DP      + SQD S+ G  ENK  QATSMHLYFPCG+IRGALSNLGI
Sbjct: 81  DNRFRWLTRMSVDP-----QNESQDNSADG--ENKVAQATSMHLYFPCGIIRGALSNLGI 133

Query: 338 PCAVSADMSNLPACSFVIRIK 276
           PCAVSAD+SNLPACSFV+RIK
Sbjct: 134 PCAVSADISNLPACSFVVRIK 154


>ref|XP_004135644.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Cucumis sativus]
          Length = 171

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/81 (76%), Positives = 68/81 (83%)
 Frame = -3

Query: 518 DNRFRWLTRMSIDPVPVIVTDSSQDPSSVGATENKAEQATSMHLYFPCGLIRGALSNLGI 339
           DNRFRWLTRMS+DP      + SQD S+ G  ENK  QATSMHLYFPCG+IRGALSNLGI
Sbjct: 97  DNRFRWLTRMSVDP-----QNESQDNSADG--ENKVAQATSMHLYFPCGIIRGALSNLGI 149

Query: 338 PCAVSADMSNLPACSFVIRIK 276
           PCAVSAD+SNLPACSFV+RIK
Sbjct: 150 PCAVSADISNLPACSFVVRIK 170


>ref|XP_002512289.1| trafficking protein particle complex subunit 6b, putative [Ricinus
           communis] gi|223548250|gb|EEF49741.1| trafficking
           protein particle complex subunit 6b, putative [Ricinus
           communis]
          Length = 175

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%)
 Frame = -3

Query: 518 DNRFRWLTRMSIDPVPVIVTDSSQDPSSVGATENKAEQATSMHLYFPCGLIRGALSNLGI 339
           DN+FRWL RMSIDP  +     SQDPS +   E+K+ QA SMHLYFPCG+IRGALSNLGI
Sbjct: 97  DNKFRWLARMSIDP-SIENIGLSQDPSVL--EESKSAQAMSMHLYFPCGIIRGALSNLGI 153

Query: 338 PCAVSADMSNLPACSFVIRIK 276
           PCAVSAD+S+LPACSFV+RIK
Sbjct: 154 PCAVSADISSLPACSFVVRIK 174


>ref|XP_003521728.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Glycine max]
          Length = 176

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/81 (70%), Positives = 63/81 (77%)
 Frame = -3

Query: 518 DNRFRWLTRMSIDPVPVIVTDSSQDPSSVGATENKAEQATSMHLYFPCGLIRGALSNLGI 339
           DN+FRWL RMSIDP    V+      S     E+KA QA SMHLYFPCG+IRGALSNLGI
Sbjct: 97  DNKFRWLARMSIDPSTENVSPVEDITSPTA--ESKAAQAMSMHLYFPCGIIRGALSNLGI 154

Query: 338 PCAVSADMSNLPACSFVIRIK 276
           PCAVSAD+SNLPACSFV+RIK
Sbjct: 155 PCAVSADISNLPACSFVVRIK 175


Top