BLASTX nr result

ID: Papaver22_contig00016111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016111
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   194   1e-47
emb|CBI29999.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   173   2e-41
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...   173   2e-41
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   168   8e-40

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  194 bits (492), Expect = 1e-47
 Identities = 114/198 (57%), Positives = 142/198 (71%), Gaps = 3/198 (1%)
 Frame = -1

Query: 587 EEQKRVLDLVKELVLRLVXXXXXXXXXXXXXXEKTLKYAMRILGSRMTPSISIDEASMAE 408
           EE+ RV DL+KELVLRL+               K+L+YA+RIL S MTPSI+ D A++AE
Sbjct: 2   EEEHRVTDLIKELVLRLLSQNPQNPSSSIDTQ-KSLRYAIRILSSLMTPSIAPDSAAIAE 60

Query: 407 SIKRHLVNEGKSSDALTFADLYTKFSSKSGSGCIQNKWSVLYLLKVISEDRRKDK-KSDS 231
           SIKR L  +GKSS AL FADLYTKF+SK+G G I+NKW+VLYLLKVISEDR+  K +SDS
Sbjct: 61  SIKRQLATQGKSSQALAFADLYTKFASKNGPGSIENKWAVLYLLKVISEDRKNQKSRSDS 120

Query: 230 IVCSGFFASTVSGGLPFLVD-ESSCNSRKTPDKSRISNG-NGGVLLISKDPENIRDVALR 57
            V SGF AS    GLP L D ES   S  + ++  +  G N GVLL+SKDPENIR++A+R
Sbjct: 121 RVSSGFSASV---GLPALFDAESGGYSGVSRNRETLEKGWNNGVLLVSKDPENIREIAVR 177

Query: 56  DFANLLKEESEIVEGCLV 3
           +FANL+KEE+E+ E  LV
Sbjct: 178 EFANLVKEENEVSEEVLV 195


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  181 bits (460), Expect = 7e-44
 Identities = 106/196 (54%), Positives = 130/196 (66%), Gaps = 1/196 (0%)
 Frame = -1

Query: 587 EEQKRVLDLVKELVLRLVXXXXXXXXXXXXXXEKTLKYAMRILGSRMTPSISIDEASMAE 408
           EE+ RV DL+KELVLRL+               K+L+YA+RIL S MTPSI+ D A++AE
Sbjct: 2   EEEHRVTDLIKELVLRLLSQNPQNPSSSIDTQ-KSLRYAIRILSSLMTPSIAPDSAAIAE 60

Query: 407 SIKRHLVNEGKSSDALTFADLYTKFSSKSGSGCIQNKWSVLYLLKVISEDRRKDK-KSDS 231
           SIKR L  +GKSS AL FADLYTKF+SK+G G I+NKW+VLYLLKVISEDR+  K +SDS
Sbjct: 61  SIKRQLATQGKSSQALAFADLYTKFASKNGPGSIENKWAVLYLLKVISEDRKNQKSRSDS 120

Query: 230 IVCSGFFASTVSGGLPFLVDESSCNSRKTPDKSRISNGNGGVLLISKDPENIRDVALRDF 51
            V SGF AS   G                         N GVLL+SKDPENIR++A+R+F
Sbjct: 121 RVSSGFSASVEKG------------------------WNNGVLLVSKDPENIREIAVREF 156

Query: 50  ANLLKEESEIVEGCLV 3
           ANL+KEE+E+ E  LV
Sbjct: 157 ANLVKEENEVSEEVLV 172


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  173 bits (439), Expect = 2e-41
 Identities = 101/201 (50%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
 Frame = -1

Query: 596 MEEEEQKRVLDLVKELVLRLVXXXXXXXXXXXXXXE-KTLKYAMRILGSRMTPSISIDEA 420
           MEE++  +VLDL+K+LVLRL+                K+L+YA+RIL SRMTPSI+ D A
Sbjct: 1   MEEDDSTKVLDLIKDLVLRLLSHNPTSNSSPTSSDFQKSLRYAIRILTSRMTPSIAPDAA 60

Query: 419 SMAESIKRHLVNEGKSSDALTFADLYTKFSSKSGSGCIQNKWSVLYLLKVISEDR--RKD 246
           ++AESIKR L  EGKSS ALTFADLYTKF+SK+G G + NKW+VLYLLK+++EDR  R+ 
Sbjct: 61  AIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVAEDRKCRQT 120

Query: 245 KKSDSIVCSGFFASTVSGGLPFLVDESSCNSRKTPDKSRISNGNGGVLLISKDPENIRDV 66
           +   S++     AS      P L  +S     K   K        GVLL++KDPEN+RDV
Sbjct: 121 QFESSMLLPNLVASD-----PVLGKKSGAAPEKEWQK--------GVLLVAKDPENLRDV 167

Query: 65  ALRDFANLLKEESEIVEGCLV 3
           A ++F+NLLKEE+E+ E  LV
Sbjct: 168 AFKEFSNLLKEENEVTEEVLV 188


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score =  173 bits (439), Expect = 2e-41
 Identities = 101/201 (50%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
 Frame = -1

Query: 596 MEEEEQKRVLDLVKELVLRLVXXXXXXXXXXXXXXE-KTLKYAMRILGSRMTPSISIDEA 420
           MEE++  +VLDL+K+LVLRL+                K+L+YA+RIL SRMTPSI+ D A
Sbjct: 1   MEEDDSTKVLDLIKDLVLRLLSHNPTSNSSPTSSDFQKSLRYAIRILTSRMTPSIAPDAA 60

Query: 419 SMAESIKRHLVNEGKSSDALTFADLYTKFSSKSGSGCIQNKWSVLYLLKVISEDR--RKD 246
           ++AESIKR L  EGKSS ALTFADLYTKF+SK+G G + NKW+VLYLLK+++EDR  R+ 
Sbjct: 61  AIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVAEDRKCRQT 120

Query: 245 KKSDSIVCSGFFASTVSGGLPFLVDESSCNSRKTPDKSRISNGNGGVLLISKDPENIRDV 66
           +   S++     AS      P L  +S     K   K        GVLL++KDPEN+RDV
Sbjct: 121 QFESSMLLPNLVASD-----PVLGKKSGAAPEKEWQK--------GVLLVAKDPENLRDV 167

Query: 65  ALRDFANLLKEESEIVEGCLV 3
           A ++F+NLLKEE+E+ E  LV
Sbjct: 168 AFKEFSNLLKEENEVTEEVLV 188


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  168 bits (425), Expect = 8e-40
 Identities = 96/206 (46%), Positives = 129/206 (62%), Gaps = 8/206 (3%)
 Frame = -1

Query: 596 MEEEEQKRVLDLVKELVLRLVXXXXXXXXXXXXXXE----KTLKYAMRILGSRMTPSISI 429
           MEEE+Q++++DLVKELV RL+                     L+YA+RIL SR+TPSIS 
Sbjct: 1   MEEEDQQKIIDLVKELVHRLLSQNPNFKTPNSNPNSTDFQNALRYAVRILSSRLTPSISP 60

Query: 428 DEASMAESIKRHLVNEGKSSDALTFADLYTKFSSKSGSGCIQNKWSVLYLLKVISEDRRK 249
           D A++AESIKR L  +GKSS ALTFADLY KF+SK+G G + NKW+VLYLLK+ISED + 
Sbjct: 61  DSAAIAESIKRRLATQGKSSQALTFADLYNKFASKNGPGSVNNKWAVLYLLKIISEDEKL 120

Query: 248 DKKSDSIVCSGFFASTVSGGLPFLVDESSCNSRKTPDKSRISNG----NGGVLLISKDPE 81
            K            +  +  LP+L   S  +S  +     +  G    N GVLL++KDPE
Sbjct: 121 AKN----------GTNSTHLLPYLALNSPDSSNDSRVNCNLKRGDKDWNNGVLLVAKDPE 170

Query: 80  NIRDVALRDFANLLKEESEIVEGCLV 3
           N+R+ A +++ NL+KEESE+ E  LV
Sbjct: 171 NLREFAFKEYVNLVKEESEVTEEVLV 196


Top