BLASTX nr result

ID: Papaver22_contig00015846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00015846
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98191.1|AC000107_14 F17F8.21 [Arabidopsis thaliana]              57   2e-06
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    56   3e-06
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|NP_174377.1| F-box domain-containing protein [Arabidopsis th...    55   9e-06

>gb|AAF98191.1|AC000107_14 F17F8.21 [Arabidopsis thaliana]
          Length = 1201

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 51/89 (57%)
 Frame = -3

Query: 526  VADSCGSPAVKSSADKGALNSVPDYFGSGSVISKEGKVQRASMESLPADIVQDILSRIPA 347
            VA S   P   +S+     +  P   G+ S  S+       + +S+P D++ DILSR+P+
Sbjct: 770  VAPSLSPPEQSTSSS----SEDPCSLGTRSFRSRTIMNSEENTDSIPIDLILDILSRLPS 825

Query: 346  ESVLECKLVCKTWETLLRRSDFTNMHLSR 260
            +S+  C+ V K WE+++R+S FT + L+R
Sbjct: 826  KSIARCRCVSKLWESMIRQSYFTELFLTR 854


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
 Frame = -3

Query: 397 ESLPADIVQDILSRIPAESVLECKLVCKTWETLLRRSDFTNMHLSRQLNHLYDGDDSNDN 218
           E+LP +++ +ILSR+P  S+++ K VCK+W T++    F  MHL+R           N N
Sbjct: 92  ETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSAR--------NPN 143

Query: 217 LAAKVEPCLFFACRTDDPDEFITLLFHGGQLSDGISIDERYIYNQNLKRIYHPPMHNKLL 38
            +      + +   + D D+   + F  G L D                I  P     LL
Sbjct: 144 FSV-----VSYETPSFDDDDHRFVPFPAGSLLDN-------------PHITFPKDPYYLL 185

Query: 37  YD----HLVGSCNGLV 2
           +D     ++GSCNGLV
Sbjct: 186 HDKDCREVIGSCNGLV 201


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
 Frame = -3

Query: 430 SKEGKVQR--ASMESLPADIVQDILSRIPAESVLECKLVCKTWETLLRRSDFTNMHLSRQ 257
           ++E K+Q      ESLP ++  DILSR+P   ++  K VC+ W +L++     +MH SR 
Sbjct: 11  AEEAKIQEHPPGTESLPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRI 70

Query: 256 LNHLYDGDDSNDNLAAKVEPCLFFACRTDDPDEFITLLFHGGQLSDGISIDERYIYNQNL 77
            N       +ND       PCL   C         +L F         ++DE  I  + +
Sbjct: 71  AN-------NND-------PCLLLLCDLPIKSHLYSLHFS--------ALDETII--ETV 106

Query: 76  KRIYHPPMHNKLLYDHLVGSCNGLV 2
            RI  P +   L    ++GSCNGL+
Sbjct: 107 TRIPVPVIPKFL----VIGSCNGLL 127


>ref|NP_174377.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|125991853|sp|P0C2G2.1|FB21_ARATH RecName:
           Full=Putative F-box protein At1g30920
           gi|332193172|gb|AEE31293.1| F-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 400

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 21/46 (45%), Positives = 36/46 (78%)
 Frame = -3

Query: 397 ESLPADIVQDILSRIPAESVLECKLVCKTWETLLRRSDFTNMHLSR 260
           +S+P D++ DILSR+P++S+  C+ V K WE+++R+S FT + L+R
Sbjct: 8   DSIPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTR 53


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