BLASTX nr result

ID: Papaver22_contig00015791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00015791
         (1559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag...   128   2e-31
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   128   2e-31
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   128   2e-31
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact...   128   2e-31
ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact...   128   2e-31

>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
            gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
            factor [Medicago truncatula]
          Length = 2398

 Score =  128 bits (321), Expect(2) = 2e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = -1

Query: 254  GLMTYFREATVHTQELLDLLVMVKCENKIQTRIKIGLNSKIPSRFPPVIFYTPKEIGGLG 75
            GLMTYFREATVHTQELLDLLV  KCENKIQTRIKIGLNSK+PSRFPPVIFYTPKEIGGLG
Sbjct: 1289 GLMTYFREATVHTQELLDLLV--KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG 1346

Query: 74   MLSMGHI 54
            MLSMGHI
Sbjct: 1347 MLSMGHI 1353



 Score = 35.8 bits (81), Expect(2) = 2e-31
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   LIPQSDL*YSQQTDVGVT 2
            LIPQSDL YSQQTDVGVT
Sbjct: 1354 LIPQSDLRYSQQTDVGVT 1371


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  128 bits (321), Expect(2) = 2e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = -1

Query: 254  GLMTYFREATVHTQELLDLLVMVKCENKIQTRIKIGLNSKIPSRFPPVIFYTPKEIGGLG 75
            GLMTYFREATVHTQELLDLLV  KCENKIQTRIKIGLNSK+PSRFPPVIFYTPKEIGGLG
Sbjct: 1310 GLMTYFREATVHTQELLDLLV--KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG 1367

Query: 74   MLSMGHI 54
            MLSMGHI
Sbjct: 1368 MLSMGHI 1374



 Score = 35.8 bits (81), Expect(2) = 2e-31
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   LIPQSDL*YSQQTDVGVT 2
            LIPQSDL YSQQTDVGVT
Sbjct: 1375 LIPQSDLRYSQQTDVGVT 1392


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  128 bits (321), Expect(2) = 2e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = -1

Query: 254  GLMTYFREATVHTQELLDLLVMVKCENKIQTRIKIGLNSKIPSRFPPVIFYTPKEIGGLG 75
            GLMTYFREATVHTQELLDLLV  KCENKIQTRIKIGLNSK+PSRFPPVIFYTPKEIGGLG
Sbjct: 1301 GLMTYFREATVHTQELLDLLV--KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG 1358

Query: 74   MLSMGHI 54
            MLSMGHI
Sbjct: 1359 MLSMGHI 1365



 Score = 35.8 bits (81), Expect(2) = 2e-31
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   LIPQSDL*YSQQTDVGVT 2
            LIPQSDL YSQQTDVGVT
Sbjct: 1366 LIPQSDLRYSQQTDVGVT 1383


>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  128 bits (321), Expect(2) = 2e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = -1

Query: 254  GLMTYFREATVHTQELLDLLVMVKCENKIQTRIKIGLNSKIPSRFPPVIFYTPKEIGGLG 75
            GLMTYFREATVHTQELLDLLV  KCENKIQTRIKIGLNSK+PSRFPPVIFYTPKEIGGLG
Sbjct: 1291 GLMTYFREATVHTQELLDLLV--KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG 1348

Query: 74   MLSMGHI 54
            MLSMGHI
Sbjct: 1349 MLSMGHI 1355



 Score = 35.8 bits (81), Expect(2) = 2e-31
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   LIPQSDL*YSQQTDVGVT 2
            LIPQSDL YSQQTDVGVT
Sbjct: 1356 LIPQSDLRYSQQTDVGVT 1373


>ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  128 bits (321), Expect(2) = 2e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = -1

Query: 254  GLMTYFREATVHTQELLDLLVMVKCENKIQTRIKIGLNSKIPSRFPPVIFYTPKEIGGLG 75
            GLMTYFREATVHTQELLDLLV  KCENKIQTRIKIGLNSK+PSRFPPVIFYTPKEIGGLG
Sbjct: 1291 GLMTYFREATVHTQELLDLLV--KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLG 1348

Query: 74   MLSMGHI 54
            MLSMGHI
Sbjct: 1349 MLSMGHI 1355



 Score = 35.8 bits (81), Expect(2) = 2e-31
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   LIPQSDL*YSQQTDVGVT 2
            LIPQSDL YSQQTDVGVT
Sbjct: 1356 LIPQSDLRYSQQTDVGVT 1373


Top