BLASTX nr result

ID: Papaver22_contig00015605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00015605
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298561.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-06
ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-06
ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] g...    57   9e-06

>ref|XP_002298561.1| predicted protein [Populus trichocarpa] gi|222845819|gb|EEE83366.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = +2

Query: 803  VAVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH---- 970
            +A + EQY +    N + E+  + +SLT++ +  LL  AY DM+LDGVQPSRD+FH    
Sbjct: 21   LATSTEQYAKRNYANNLSEYNTVFTSLTAKRRHYLLRDAYDDMVLDGVQPSRDTFHSLIA 80

Query: 971  -*KERARSQDAF 1003
               + +R QDAF
Sbjct: 81   GTMKGSRLQDAF 92



 Score = 24.6 bits (52), Expect(2) = 1e-06
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 976  RASKVARCFYFNDQKEATGLVPE 1044
            + S++   FYF D+ +  GL+P+
Sbjct: 84   KGSRLQDAFYFRDEMKTMGLLPD 106


>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial [Vitis vinifera]
            gi|296087577|emb|CBI34833.3| unnamed protein product
            [Vitis vinifera]
          Length = 445

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
 Frame = +2

Query: 806  AVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH----- 970
            A + E+Y +    + V E+T + SSLT+Q +  LL  AY DM+LDGVQPSRD FH     
Sbjct: 26   AASTEEYAKRNYASNVSEYTTVVSSLTAQRRHFLLRDAYDDMMLDGVQPSRDIFHSLIVG 85

Query: 971  *KERARSQDAFILMIKRK 1024
              + AR QD+F  + + K
Sbjct: 86   TMKGARLQDSFFFIDQMK 103


>ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] gi|51038158|gb|AAT93961.1|
            unknow protein [Oryza sativa Japonica Group]
            gi|51038198|gb|AAT94001.1| unkonw protein [Oryza sativa
            Japonica Group] gi|113578184|dbj|BAF16547.1| Os05g0145600
            [Oryza sativa Japonica Group]
            gi|215686674|dbj|BAG88927.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222630177|gb|EEE62309.1|
            hypothetical protein OsJ_17098 [Oryza sativa Japonica
            Group]
          Length = 454

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
 Frame = +2

Query: 803  VAVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH---- 970
            VA + E+Y+R    N + E+  +  SLT+Q +  LL  AY DM+LDGVQP RD+FH    
Sbjct: 32   VATSTEEYNRRNYANNISEYNTVFGSLTAQRRHYLLRDAYDDMMLDGVQPVRDTFHNLIV 91

Query: 971  -*KERARSQDAFILMIKRKQ 1027
               + +R QDAF    + K+
Sbjct: 92   GAMKGSRLQDAFYFRDQMKE 111


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