BLASTX nr result

ID: Papaver22_contig00015248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00015248
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    82   3e-14
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    75   6e-12
gb|AFK37781.1| unknown [Lotus japonicus]                               64   1e-08
ref|XP_003612153.1| F-box family protein [Medicago truncatula] g...    64   2e-08
gb|AFK40065.1| unknown [Medicago truncatula]                           62   4e-08

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
 Frame = -1

Query: 365 KRIKHPRVEMVEKYHVLVVGSCNGLICLSVPHHGMGDPIYVCNPYTGEYANLPRLIIDES 186
           KRI+ P   M+ ++ V  VGSCNGL+CLS       D +Y+ NP+TG Y  LP+ +    
Sbjct: 108 KRIRAPFSSMMPEFEV--VGSCNGLLCLS--DSLFNDSLYIYNPFTGRYKELPKSL---- 159

Query: 185 HDTTGGYCYPNIVCGFGHLQRSNEYKVVRIYY-----PSYP-------GVGRVQIYTLGS 42
                 Y    +V GFG   ++NEYKV+RI Y       YP        + +VQI TLG 
Sbjct: 160 -----QYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLG- 213

Query: 41  CIGWRSVGEIKY 6
           C GWRS+G++ Y
Sbjct: 214 CPGWRSLGKVSY 225


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
 Frame = -1

Query: 365 KRIKHPRVEMVEKYHVLVVGSCNGLICLSVPHHGMGDPIYVCNPYTGEYANLPRLIIDES 186
           KRI  P   M+ ++ V  VGSCNGL+CLS   +   D +Y+ NP+TG Y  LP+ +    
Sbjct: 109 KRIPAPFSSMMPEFEV--VGSCNGLLCLSDSLY--NDSLYIYNPFTGCYKELPKSL---- 160

Query: 185 HDTTGGYCYPNIVCGFGHLQRSNEYKVVRIYY-----PSYP-------GVGRVQIYTLGS 42
                 Y    +V GFG   ++ EYKV+RI Y       YP        +  VQI TLG 
Sbjct: 161 -----QYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLG- 214

Query: 41  CIGWRSVGEIKY 6
           C  WRS+G++ Y
Sbjct: 215 CPEWRSLGKVSY 226


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = -1

Query: 314 VVGSCNGLICLSVPHHGMGDPIYVCNPYTGEYANLPRLIIDESHDTTGGYCYPNIVCGFG 135
           VV SCNGLICL        D   VCNP TGE+  LP+         T  +    I  GFG
Sbjct: 177 VVNSCNGLICLCDRER---DYFVVCNPITGEFIRLPQT---SRIGKTNKFSIQEIYAGFG 230

Query: 134 HLQRSNEYKVVRIY--YPSYPGVGRVQIYTLGSCIGWRSV 21
              ++NEYKVVRI      Y G+   +++TLG+   WR+V
Sbjct: 231 FQPKNNEYKVVRILRGLQFYHGIMAAEVHTLGTST-WRNV 269


>ref|XP_003612153.1| F-box family protein [Medicago truncatula]
           gi|355513488|gb|AES95111.1| F-box family protein
           [Medicago truncatula]
          Length = 507

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -1

Query: 314 VVGSCNGLICLSVPHHGMGDPIYVCNPYTGEYANLPRLIIDESHDTTGGYCYPNIVCGFG 135
           +V SCNGL+CLS P    G+P+ +CNP TGE+  LP  I D++     G        GFG
Sbjct: 181 IVNSCNGLLCLSDP--SFGNPLVICNPVTGEFIRLPESIADQNRVRRLGQ------AGFG 232

Query: 134 HLQRSNEYKVVRIY 93
              ++NEYKV+ ++
Sbjct: 233 FQPKTNEYKVINMW 246


>gb|AFK40065.1| unknown [Medicago truncatula]
          Length = 479

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
 Frame = -1

Query: 314 VVGSCNGLICLSVPHHGMGDPIYVCNPYTGEYANLPRLIIDESHDTTGGYCYPNIVCGFG 135
           +V SCNGL+CLS P    G+PI +CNP TGE+  LP    + +     G        GFG
Sbjct: 170 IVNSCNGLLCLSDP--SFGNPIVICNPVTGEFIRLPESTTNRTRVRMQGQ------AGFG 221

Query: 134 HLQRSNEYKVVRIYYPSYPGVGR-------VQIYTLGSCIGWRSV 21
              ++NEYKV+ ++        +       ++I TLG+   WR+V
Sbjct: 222 FQPKTNEYKVISVWIRHVKHANQWVFERVILEINTLGT-TSWRNV 265


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