BLASTX nr result
ID: Papaver22_contig00015237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00015237
(735 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ... 153 9e-39
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ... 151 3e-38
emb|CBI17233.3| unnamed protein product [Vitis vinifera] 149 3e-38
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 149 3e-38
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei... 147 1e-36
>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1181
Score = 153 bits (386), Expect(2) = 9e-39
Identities = 80/140 (57%), Positives = 97/140 (69%)
Frame = +3
Query: 3 VSVGWRRYQIRPIYAQEVGWRRLHRIHCIPEHEDCLAMFWGPLAPPDTGIVAVYNPEGNK 182
VSVGWRRYQ PIYA E R + PEH CLAMFWGPLAPP+TG+VA+ N N+
Sbjct: 839 VSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAIQNLSNNQ 898
Query: 183 AVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTIDMFTSDLEIEWLEGA 362
A FRI+AT V+L+F AA IV KI K V P KIF++TAL DMFTSDLE+ EGA
Sbjct: 899 ATFRITATAVVLEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFEGA 954
Query: 363 EVQTARGAQGNVKKAAQEKL 422
++T G +G VKKAA+E++
Sbjct: 955 AIRTVSGIRGQVKKAAKEEI 974
Score = 33.5 bits (75), Expect(2) = 9e-39
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Frame = +2
Query: 542 KEGIASSSLQHEISLSDKVFMCVWDQV---------GELKDSRDCIEQGMETVGELK 685
KEGIA + + +I +SD VF+ W QV RD +GM TV EL+
Sbjct: 986 KEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTVAELR 1042
>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1176
Score = 151 bits (381), Expect(2) = 3e-38
Identities = 80/140 (57%), Positives = 96/140 (68%)
Frame = +3
Query: 3 VSVGWRRYQIRPIYAQEVGWRRLHRIHCIPEHEDCLAMFWGPLAPPDTGIVAVYNPEGNK 182
VSVGWRRYQ PIYA E R + PEH CLAMFWGPLAPP+TG+VA N N+
Sbjct: 834 VSVGWRRYQTTPIYAIEDSNGRDRMLKYTPEHMHCLAMFWGPLAPPNTGVVAFQNLSNNQ 893
Query: 183 AVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTIDMFTSDLEIEWLEGA 362
A FRI+AT V+L+F AA IV KI K V P KIF++TAL DMFTSDLE+ EGA
Sbjct: 894 ATFRITATAVVLEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFEGA 949
Query: 363 EVQTARGAQGNVKKAAQEKL 422
++T G +G VKKAA+E++
Sbjct: 950 AIRTVSGIRGQVKKAAKEEI 969
Score = 33.9 bits (76), Expect(2) = 3e-38
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = +2
Query: 542 KEGIASSSLQHEISLSDKVFMCVWDQV---------GELKDSRDCIEQGMETVGELK 685
KEGIA + + +I +SD VF+ W QV RD +GM+TV EL+
Sbjct: 981 KEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMKTVAELR 1037
>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 149 bits (377), Expect(2) = 3e-38
Identities = 81/140 (57%), Positives = 96/140 (68%)
Frame = +3
Query: 3 VSVGWRRYQIRPIYAQEVGWRRLHRIHCIPEHEDCLAMFWGPLAPPDTGIVAVYNPEGNK 182
VS+GWRRYQ P+YA E R + EH CLAMFWGPLAPP+TG+VAV N N+
Sbjct: 966 VSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQ 1025
Query: 183 AVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTIDMFTSDLEIEWLEGA 362
A FRI AT V+L+F AA +V KI K V P KIF++TAL +MFTSDLEI EGA
Sbjct: 1026 ATFRIIATAVVLEFNHAARLVKKI----KLVGEPCKIFKKTALIKNMFTSDLEIARFEGA 1081
Query: 363 EVQTARGAQGNVKKAAQEKL 422
VQTA G +G VKKAA+E+L
Sbjct: 1082 AVQTASGIRGQVKKAAKEEL 1101
Score = 35.0 bits (79), Expect(2) = 3e-38
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +2
Query: 539 PKEGIASSSLQHEISLSDKVFMCVWDQV---------GELKDSRDCIEQGMETVGELK 685
P+EGIA + + I +SD VF+ W +V RD QGM+TV EL+
Sbjct: 1112 PREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAELR 1169
>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
Length = 1139
Score = 149 bits (377), Expect(2) = 3e-38
Identities = 81/140 (57%), Positives = 96/140 (68%)
Frame = +3
Query: 3 VSVGWRRYQIRPIYAQEVGWRRLHRIHCIPEHEDCLAMFWGPLAPPDTGIVAVYNPEGNK 182
VS+GWRRYQ P+YA E R + EH CLAMFWGPLAPP+TG+VAV N N+
Sbjct: 800 VSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQ 859
Query: 183 AVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTIDMFTSDLEIEWLEGA 362
A FRI AT V+L+F AA +V KI K V P KIF++TAL +MFTSDLEI EGA
Sbjct: 860 ATFRIIATAVVLEFNHAARLVKKI----KLVGEPCKIFKKTALIKNMFTSDLEIARFEGA 915
Query: 363 EVQTARGAQGNVKKAAQEKL 422
VQTA G +G VKKAA+E+L
Sbjct: 916 AVQTASGIRGQVKKAAKEEL 935
Score = 35.0 bits (79), Expect(2) = 3e-38
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +2
Query: 539 PKEGIASSSLQHEISLSDKVFMCVWDQV---------GELKDSRDCIEQGMETVGELK 685
P+EGIA + + I +SD VF+ W +V RD QGM+TV EL+
Sbjct: 946 PREGIARCTFEDRILMSDLVFLRAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAELR 1003
>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
BMS1-like protein [Medicago truncatula]
Length = 1200
Score = 147 bits (370), Expect(2) = 1e-36
Identities = 78/140 (55%), Positives = 95/140 (67%)
Frame = +3
Query: 3 VSVGWRRYQIRPIYAQEVGWRRLHRIHCIPEHEDCLAMFWGPLAPPDTGIVAVYNPEGNK 182
VSVGWRRYQ P+YA E R + PEH CLAMFWGPLAPP+TGIVAV N+
Sbjct: 835 VSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQ 894
Query: 183 AVFRISATGVILDFTQAAEIVAKIAKKRKQVRTPLKIFEETALTIDMFTSDLEIEWLEGA 362
A FRI+AT V+++F AA IV KI K V P KIF++TAL DMFTSDLE+ EGA
Sbjct: 895 ATFRITATAVVVEFNHAARIVKKI----KLVGYPCKIFKKTALIKDMFTSDLEVARFEGA 950
Query: 363 EVQTARGAQGNVKKAAQEKL 422
++T G +G VKK A+E++
Sbjct: 951 AIRTVSGIRGQVKKVAKEEI 970
Score = 32.7 bits (73), Expect(2) = 1e-36
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Frame = +2
Query: 542 KEGIASSSLQHEISLSDKVFMCVWDQV---------GELKDSRDCIEQGMETVGELK 685
KEGIA + + +I +SD VF+ W QV RD +GM TV EL+
Sbjct: 982 KEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELR 1038